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(鳞翅目:细蛾科)线粒体全基因组及其系统发育分析

The complete mitochondrial genome of (Lepidoptera: Gracillariidae) with phylogenetic consideration.

作者信息

Zhang Zhu-Ting, Li Jing, Jin Dao-Chao

机构信息

Provincial Key Laboratory for Agricultural Pest Management of Mountainous Regions, Institute of Entomology, Guizhou University, Guiyang, PR China.

School of Life and Health Science, Kaili University, Kaili, PR China.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 15;5(3):2853-2854. doi: 10.1080/23802359.2020.1790326.

Abstract

The complete mitogenome of (GenBank accession number MT611524) is 15,511 bp in length, and harbors 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes, and an A + T-rich region. The overall base composition is A (40.04%), C (10.64%), G (7.62%), and T (41.70%), showing AT-rich feature (81.74%). ATG, ATT, CGA were initiation codons and TAA and T were termination codons. All the 22 tRNAs displayed a common cloverleaf secondary structure, except for which lacked the dihydrouracil (DHU) arm. Phylogenetic tree based on 13 PCGs showed that has a close phylogenetic relationship with and and belongs to Gracillariidae.

摘要

(GenBank登录号MT611524)的完整线粒体基因组长度为15511 bp,包含13个蛋白质编码基因(PCGs)、22个转运RNA基因(tRNAs)、两个核糖体RNA基因和一个富含A+T的区域。总体碱基组成为A(40.04%)、C(10.64%)、G(7.62%)和T(41.70%),呈现出富含AT的特征(81.74%)。ATG、ATT、CGA为起始密码子,TAA和T为终止密码子。除了缺少二氢尿嘧啶(DHU)臂的 外,所有22个tRNAs都呈现出常见的三叶草二级结构。基于13个PCGs构建的系统发育树表明, 与 和 具有密切的系统发育关系,属于细蛾科。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7a0/7782291/4b6635b3e17f/TMDN_A_1790326_F0001_B.jpg

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