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橘点若鲹(鲈形目,鲹科)的完整线粒体基因组及与其他鲹科物种的比较分析

Complete mitochondrial genome of the orange-spotted trevally, (Perciformes, Carangidae) and a comparative analysis with other Carangidae species.

作者信息

Song Ha Yeun, Jung Yun-Hwan, Choi Young Ji, Kim Bora, Nguyen Tu Van, Lee Dae-Sung

机构信息

Department of Genetic Resources Research, National Marine Biodiversity Institute of Korea, Janghang-eup, Republic of Korea.

International Center for Marine Biodiversity, National Marine Biodiversity Institute of Korea, Janghang-eup, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2020 Aug 3;5(3):3120-3121. doi: 10.1080/23802359.2020.1797587.

DOI:10.1080/23802359.2020.1797587
PMID:33458081
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782907/
Abstract

The complete mitochondrial genome of the orange-spotted trevally, , which belongs to the family Carangidae was determined. The complete mitochondrial genome has a length of 16,556 bp and consists of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a control region. has a mitochondrial gene arrangement that is typical of vertebrates. Phylogenetic analysis using mitochondrial genomes of 13 related species revealed that formed a well-supported monophyletic group with the other Carangidae species.

摘要

测定了属于鲹科的橘点若鲹的完整线粒体基因组。该完整线粒体基因组长度为16,556 bp,由13个蛋白质编码基因、22个tRNA基因、两个rRNA基因和一个控制区组成。其线粒体基因排列是脊椎动物的典型排列。使用13个相关物种的线粒体基因组进行的系统发育分析表明,橘点若鲹与其他鲹科物种形成了一个得到充分支持的单系类群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4acd/7782907/8435295a8e7e/TMDN_A_1797587_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4acd/7782907/8435295a8e7e/TMDN_A_1797587_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4acd/7782907/8435295a8e7e/TMDN_A_1797587_F0001_B.jpg

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tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes.tRNAscan-SE在线工具:整合搜索与上下文以分析转运RNA基因
Nucleic Acids Res. 2016 Jul 8;44(W1):W54-7. doi: 10.1093/nar/gkw413. Epub 2016 May 12.
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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.