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布氏食蛞蝓蛇(蛇目:游蛇科)的线粒体基因组

Mitochondrial genome of the Boulenger's Slug-eating snake (Serpentes: Pareidae).

作者信息

Huang Ruyi, Peng Lifang, Yang Diancheng, Yong Zhang, Huang Song

机构信息

Shanghai Jian Qiao University, Shanghai, China.

Huangshan Noah Biodiversity Institute, Huangshan, China.

出版信息

Mitochondrial DNA B Resour. 2020 Aug 12;5(3):3161-3162. doi: 10.1080/23802359.2020.1804471.

Abstract

The Boulenger's Slug-eating snake is a species of snake in the family Pareidae. The complete mitochondrial genome sequence (mitogenome) of this species was determined by shotgun sequencing. The total length of mitogenome is 16,778 bp and contains 13 protein-coding genes, 22 tRNA genes, two ribosome RNA genes, and two control regions (CR). Its base composition was 31.6% for A, 24.6% for T, 14.5% for G and 29.3% for C. All the protein-coding genes in . were distributed on the H-strand, except for the ND6 subunit gene and eight tRNA genes which were encoded on the L-strand. The phylogenetic tree of . and 13 other related species was reconstructed using the maximum-likelihood (ML) method. The DNA data presented here will be useful to study the evolutionary relationships of . .

摘要

布伦格食蛞蝓蛇是水游蛇科的一种蛇类。该物种的完整线粒体基因组序列(线粒体基因组)通过鸟枪法测序确定。线粒体基因组全长16778bp,包含13个蛋白质编码基因、22个tRNA基因、两个核糖体RNA基因和两个控制区(CR)。其碱基组成为:A占31.6%,T占24.6%,G占14.5%,C占29.3%。所有蛋白质编码基因均分布于重链上,除了ND6亚基基因和8个tRNA基因编码于轻链上。使用最大似然法(ML)重建了该物种与其他13个相关物种的系统发育树。此处呈现的DNA数据将有助于研究该物种的进化关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2b0/7782912/8c1459e5934e/TMDN_A_1804471_F0001_C.jpg

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