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两个物种(和 )的完整叶绿体基因组序列。

The complete chloroplast genome sequences of two species ( and ).

作者信息

Shao Wenhao, Jiang Jingmin

机构信息

Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2020 Aug 26;5(3):3191-3192. doi: 10.1080/23802359.2020.1810148.

Abstract

The complete chloroplast genome sequence of and Chaenomeles thibetica was characterized from Illumina pair-end sequencing. The length of . and . chloroplast genome of was 159,875 bp and 159,907 bp, respectively. The . chloroplast genome contained a large single-copy region (LSC) of 87,813bp, a small single-copy region (SSC) of 19,304 bp, and two inverted repeat (IR) regions of 26,379 bp, which is a quadripartite structure. Similarity, The . chloroplast genome also contained a quadripartite structure, including a LSC region (87,851 bp), a SSC region (19,298 bp), and two IR regions (26,379 bp). The overall GC content of . and . are both 36.57%. The . and . chloroplast genome contains 130 complete genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The . chloroplast genome contains 130 complete genes, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The neighbour-joining phylogenetic analysis showed that . and . clustered together, indicated that . and . have closed evolutionary relationship compared with other s species.

摘要

通过Illumina双端测序对[物种名称缺失]和西藏木瓜的完整叶绿体基因组序列进行了表征。[物种名称缺失]和西藏木瓜的叶绿体基因组长度分别为159,875 bp和159,907 bp。[物种名称缺失]的叶绿体基因组包含一个87,813 bp的大单拷贝区域(LSC)、一个19,304 bp的小单拷贝区域(SSC)和两个26,379 bp的反向重复(IR)区域,呈四分体结构。同样,西藏木瓜的叶绿体基因组也呈四分体结构,包括一个LSC区域(87,851 bp)、一个SSC区域(19,298 bp)和两个IR区域(26,379 bp)。[物种名称缺失]和西藏木瓜的总体GC含量均为36.57%。[物种名称缺失]和西藏木瓜的叶绿体基因组包含130个完整基因,包括85个蛋白质编码基因、37个tRNA基因和8个rRNA基因。邻接法系统发育分析表明,[物种名称缺失]和西藏木瓜聚集在一起,表明与其他[物种名称缺失]物种相比,[物种名称缺失]和西藏木瓜具有密切的进化关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56cd/7782059/efb0eb9c2f21/TMDN_A_1810148_F0001_C.jpg

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