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人类酪氨酸酶及眼皮肤白化病1型相关突变的功能分析

Functional analysis of human tyrosinase and OCA1 associated mutations.

作者信息

Patel Milan, Sergeev Yuri

机构信息

National Eye Institute, National Institutes of Health, Bethesda, MD 20892, USA.

出版信息

J Anal Pharm Res. 2020;9(3):81-89. Epub 2020 Aug 24.

Abstract

Oculocutaneous albinism type 1 (OCA1) is an autosomal recessive disorder caused by mutations in the tyrosinase gene. OCA1 exists in two forms: OCA1A and OCA1B. OCA1A is caused by a full loss of the human tyrosinase protein (Tyr), leading to an absence of pigment in skin, hair, and eyes, while OCA1B has reduced Tyr catalytic activity and pigment. The current understanding of the disease is hampered by the absence of information regarding the alterations of protein structure and the effects leading to either form of OCA1. Here, we used computational methods to find a general mechanism for establishing this link. Tyr and mutant variants were built through homology modeling, glycosylated , minimized, and simulated using 100 ns molecular dynamics in water. For OCA1B mutants, cavity size is linked to ΔΔG values for mutants, suggesting that partial loss of Tyr is associated with the destabilizing effect of the EGF-like domain movement. In OCA1A, active site mutation simulations indicate that the absence of O leads to protein instability. OCA1B mutants are described in severity by the size of the cavity within the EGF-Tyr interface, while active site OCA1A mutants are unable to fully coordinate copper, leading to an absence of O and Tyr instability. In patients with known genotypes, free energy changes may help identify the severity of the disease by assessing either the allosteric effect of the EGF-Tyr cavity in OCA1B or the active site instability in OCA1A.

摘要

1型眼皮肤白化病(OCA1)是一种常染色体隐性疾病,由酪氨酸酶基因突变引起。OCA1有两种形式:OCA1A和OCA1B。OCA1A是由人类酪氨酸酶蛋白(Tyr)完全缺失所致,导致皮肤、毛发和眼睛均无色素沉着,而OCA1B的Tyr催化活性和色素减少。目前,由于缺乏关于蛋白质结构改变以及导致OCA1两种形式的相关影响的信息,对该疾病的了解受到了阻碍。在此,我们使用计算方法来寻找建立这种联系的一般机制。通过同源建模构建Tyr及其突变变体,进行糖基化、最小化处理,并在水中使用100纳秒分子动力学进行模拟。对于OCA1B突变体,腔大小与突变体的ΔΔG值相关,这表明Tyr的部分缺失与表皮生长因子(EGF)样结构域移动的去稳定化作用有关。在OCA1A中,活性位点突变模拟表明O的缺失导致蛋白质不稳定。OCA1B突变体的严重程度可通过EGF-Tyr界面内的腔大小来描述,而活性位点OCA1A突变体无法完全配位铜,导致O缺失和Tyr不稳定。在已知基因型的患者中,自由能变化可能有助于通过评估OCA1B中EGF-Tyr腔的变构效应或OCA1A中活性位点的不稳定性来确定疾病的严重程度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d702/7808255/0f2a425eb3fe/nihms-1637382-f0001.jpg

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