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来自里海的具有抗白血病作用的L-天冬酰胺酶的宏基因组发现及功能验证。

Metagenomic discovery and functional validation of L-asparaginases with anti-leukemic effect from the Caspian Sea.

作者信息

Sobat Motahareh, Asad Sedigheh, Kabiri Mahboubeh, Mehrshad Maliheh

机构信息

Department of Biotechnology, College of Science, University of Tehran, Tehran, Iran.

Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.

出版信息

iScience. 2021 Jan 5;24(1):101973. doi: 10.1016/j.isci.2020.101973. eCollection 2021 Jan 22.

Abstract

By screening 27,000 publicly available prokaryotic genomes, we recovered ca. 6300 type I and ca. 5200 type II putative L-asparaginase highlighting the vast potential of prokaryotes. Caspian water with similar salt composition to the human serum was targeted for L-asparaginase screening. We screened ca. three million predicted genes of its assembled metagenomes that resulted in annotation of 87 putative L-asparaginase genes. The L-asparagine hydrolysis was experimentally confirmed by synthesizing and cloning three selected genes in . Catalytic parameters of the purified enzymes were determined to be among the most desirable reported values. Two recombinant enzymes represented remarkable anti-proliferative activity (IC50 <1IU/ml) against leukemia cell line Jurkat while no cytotoxic effect on human erythrocytes or human umbilical vein endothelial cells was detected. Similar salinity and ionic concentration of the Caspian water to the human serum highlights the potential of secretory L-asparaginases recovered from these metagenomes as potential treatment agents.

摘要

通过筛选27000个公开可用的原核生物基因组,我们发现了约6300个I型和约5200个II型假定的L-天冬酰胺酶,突出了原核生物的巨大潜力。将盐成分与人类血清相似的里海水作为L-天冬酰胺酶筛选的目标。我们筛选了其组装宏基因组中约300万个预测基因,结果注释出87个假定的L-天冬酰胺酶基因。通过在[具体内容缺失]中合成并克隆三个选定基因,实验证实了L-天冬酰胺的水解。所纯化酶的催化参数被确定为已报道的最理想值之一。两种重组酶对白血病细胞系Jurkat表现出显著的抗增殖活性(IC50 <1IU/ml),而未检测到对人红细胞或人脐静脉内皮细胞的细胞毒性作用。里海水与人类血清相似的盐度和离子浓度突出了从这些宏基因组中回收的分泌型L-天冬酰胺酶作为潜在治疗剂的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7184/7797908/e120ae245cad/fx1.jpg

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