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基于系统发育分析的(鲈形目:鲷科)线粒体全基因组

The complete mitochondrial genome of (Perciformes: Sparidae) with phylogenetic consideration.

作者信息

Ma Xilan, Xie Zhenzhen, Zhou Libin, Chen Yongzhi

机构信息

Huizhou University, Huizhou, Guangdong, China.

State Key Laboratory of Biocontrol, Institute of Aquatic Economic Animals and the Guangdong Province Key Laboratory for Aquatic Economic Animals, Sun Yat-Sen University, Guangzhou, Guangdong, China.

出版信息

Mitochondrial DNA B Resour. 2016 Jun 20;1(1):348-349. doi: 10.1080/23802359.2015.1137839.

Abstract

The complete mitochondrial genome of the was presented in this study. The mitochondrial genome is 16,798 bp long and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. The gene order and composition of mitochondrial genome was similar to that of most other vertebrates. The nucleotide compositions of the light strand in descending order is 28.04% of T, 27.94% of G, 27.87% of A and 16.15% of C. With the exception of the NADH dehydrogenase subunit 6 (ND6) and 8 tRNA genes, all other mitochondrial genes are encoded on the heavy strand. The phylogenetic analysis by maximum-likelihood method shown that he has the closer relationship to the in the phylogenetic relationship.

摘要

本研究展示了该物种的完整线粒体基因组。线粒体基因组长度为16,798 bp,由13个蛋白质编码基因、2个rRNA基因、22个tRNA基因和一个控制区组成。该物种线粒体基因组的基因顺序和组成与大多数其他脊椎动物相似。轻链的核苷酸组成按降序排列为:T占28.04%,G占27.94%,A占27.87%,C占16.15%。除了NADH脱氢酶亚基6(ND6)和8个tRNA基因外,所有其他线粒体基因都在重链上编码。通过最大似然法进行的系统发育分析表明,在系统发育关系中,该物种与另一物种关系更近。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e71a/7800553/68cf044de866/TMDN_A_1137839_F0001_B.jpg

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