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(鲈形目:南极龙科)线粒体基因组的分离、特征分析及系统发育研究

Isolation and characterization of the mitochondrial genome of (Perciformes: Bathydraconidae) with phylogenetic consideration.

作者信息

Song Wei, Li Lingzhi, Huang Hongliang, Chen Fenfang, Zhao Ming, Jiang Keji, Zhang Fengying, Ma Chunyan, Chen Xuezhong, Ma Lingbo

机构信息

Key Laboratory of Oceanic and Polar Fisheries, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China.

College of Fisheries and Life Sciences, Shanghai Ocean University, Shanghai, China.

出版信息

Mitochondrial DNA B Resour. 2017 Aug 16;2(2):526-527. doi: 10.1080/23802359.2017.1361361.

Abstract

is is an Antarctic fish living in the Southern Ocean. Until now, studies on are still limited. As an Antarctic fish, obtaining and characterization of the mitochondrial genome of will be important for elucidation of the mechanism of cold-adapting evolution in mitochondrion. In this study, we first isolated and characterized the mitochondrial genome sequence of with 15,987 bp in length. It contained of 34 genes (12 protein-coding genes, 20 transfer RNA genes, 2 ribosomal RNA genes) and a partial putative control region. Gene organization and nucleotide composition of obtained mito-genome were similar to those of other Antarctic fish. Twenty-eight genes were encoded by heavy strand, while six genes were encoded by light strand. Further, the phylogenetic tree, which based on 12 protein-coding genes, revealed that the was genetically closest to species among 18 species. We hope this work would be helpful for the population genetics and molecular evolution studies.

摘要

这是一种生活在南大洋的南极鱼类。到目前为止,对其的研究仍然有限。作为一种南极鱼类,获取并表征其线粒体基因组对于阐明线粒体冷适应进化机制具有重要意义。在本研究中,我们首先分离并表征了长度为15987 bp的该鱼类线粒体基因组序列。它包含34个基因(12个蛋白质编码基因、20个转运RNA基因、2个核糖体RNA基因)和一个部分假定控制区。所获得的线粒体基因组的基因组织和核苷酸组成与其他南极鱼类相似。28个基因由重链编码,而6个基因由轻链编码。此外,基于12个蛋白质编码基因构建的系统发育树表明,在18个物种中,该鱼类在遗传上与某物种最为接近。我们希望这项工作将有助于种群遗传学和分子进化研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d69b/7799673/e5a992148f2e/TMDN_A_1361361_F0001_B.jpg

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