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(鲈形目:鲾科)的完整线粒体基因组序列。

The complete mitochondrial genome sequence of (Perciformes: Leiognathidae).

作者信息

Shi Wei, Wu Baosheng, Yu Hui

机构信息

College of Life Science, Foshan University, Foshan, Guangdong, PR China.

CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, PR China.

出版信息

Mitochondrial DNA B Resour. 2018 Jan 3;3(1):71-72. doi: 10.1080/23802359.2017.1422404.

Abstract

The complete mitochondrial genome of was sequenced by high throughput sequencing method in this study. Length of this genome is 16,517 bp, containing 13 protein-coding genes, 22 tRNA genes, two rRNA genes and one large non-coding region. and eight tRNA genes are encoded by L-strand, and others are encoded by H-strand, which is similar to those in most vertebrates. The nucleotide composition of the whole mitogenome is 29.9% A, 30.1% C, 15.1% G, and 25.0% T, with a slight bias of A + T content (54.9%). Phylogenetic tree based on the first and second codon sequences of 12 protein coding genes (except ) shows that the clade of is closely clustered with that of , and families Rachycentridae and Carangidae have the closest relationship to Leiognathidae.

摘要

本研究采用高通量测序方法对[物种名称]的完整线粒体基因组进行了测序。该基因组长度为16,517 bp,包含13个蛋白质编码基因、22个tRNA基因、两个rRNA基因和一个大的非编码区。[部分基因名称]和8个tRNA基因由轻链(L链)编码,其他基因由重链(H链)编码,这与大多数脊椎动物的情况相似。整个线粒体基因组的核苷酸组成为:A占29.9%、C占30.1%、G占15.1%、T占25.0%,A+T含量略有偏向(54.9%)。基于12个蛋白质编码基因(除[某基因名称]外)的第一和第二密码子序列构建的系统发育树表明,[物种名称]的进化枝与[另一物种名称]的进化枝紧密聚类,军曹鱼科和鲹科与眶棘鲈科的关系最为密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/feeb/7800585/82beadf5484d/TMDN_A_1422404_F0001_B.jpg

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