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来自越南芹椰红树林的热带牡蛎的完整线粒体DNA。

The complete mitochondrial DNA of the tropical oyster from the Cần Giò' mangrove in Vietnam.

作者信息

Gastineau Romain, Nguyễn Đŭc-Hùng, Lemieux Claude, Turmel Monique, Tremblay Réjean, Nguyễn Văn Duy, Widowati Ita, Witkowski Andrzej, Mouget Jean-Luc

机构信息

Natural Sciences Research and Educational Center and Palaeoceanology Unit, Faculty of Geosciences, University of Szczecin, Szczecin, Poland.

Faculty of Natural Sciences Pedagogy, Saigon University, Ho Chi Minh City, Vietnam.

出版信息

Mitochondrial DNA B Resour. 2018 Apr 12;3(1):462-463. doi: 10.1080/23802359.2018.1462126.

DOI:10.1080/23802359.2018.1462126
PMID:33474205
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800500/
Abstract

The complete mitochondrial genome of the oyster from the Cần Giò' mangrove in Vietnam has been sequenced. It consists of a circular DNA molecule of 21020 base pairs (bp), coding for 12 proteins, 20 transfer RNAs, and two ribosomal RNAs. Like the mitogenomes of and sp. DB1, it contains a non-coding region and two ORFs. The mitogenome provides information that could improve the molecular phylogeny of Asian oysters and be useful to the development of oyster aquaculture in South East Asia.

摘要

越南芹椰红树林牡蛎的完整线粒体基因组已完成测序。它由一个21020个碱基对（bp）的环状DNA分子组成，编码12种蛋白质、20种转移RNA和两种核糖体RNA。与 和 sp. DB1的线粒体基因组一样，它包含一个非编码区和两个开放阅读框。该线粒体基因组提供的信息可改善亚洲牡蛎的分子系统发育，并有助于东南亚牡蛎养殖业的发展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fed/7800500/af74e270c9ab/TMDN_A_1462126_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fed/7800500/af74e270c9ab/TMDN_A_1462126_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fed/7800500/af74e270c9ab/TMDN_A_1462126_F0001_B.jpg

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本文引用的文献

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Gene. 2012 Oct 10;507(2):112-8. doi: 10.1016/j.gene.2012.07.032. Epub 2012 Jul 27.
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Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies.雷：同时组装来自多种高通量测序技术的读数。
J Comput Biol. 2010 Nov;17(11):1519-33. doi: 10.1089/cmb.2009.0238. Epub 2010 Oct 20.
3
Comparison of seven Crassostrea mitogenomes and phylogenetic analyses.
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Mol Phylogenet Evol. 2010 Oct;57(1):448-54. doi: 10.1016/j.ympev.2010.05.029. Epub 2010 Jun 8.
4
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5
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