（小檗科）的完整叶绿体基因组：一种中国东部特有的濒危物种。
The complete chloroplast genome of (Berberidaceae): an endangered species endemic to Eastern China.
作者信息
Yang Zhaoping, Peng Zhengkang, Zhang Hongwei, Lee Joongku, Liu Xuelian, Fu Chengxin
机构信息
Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou, China.
College of Life Sciences, Tarim University, Alaer, China.
出版信息
Mitochondrial DNA B Resour. 2018 Jul 3;3(2):713-714. doi: 10.1080/23802359.2018.1483760.
is an endangered species in the family Berberidaceae. In this study, we assembled the chloroplast (cp) genome of and reconstructed the phylogenetic tree of Berberidaceae based on the complete cp genome. The cp genome of is 160,136 bp in length, comprising a pair of inverted repeat (IR) regions (26,424 bp) separated by a large single-copy (LSC) region (87,580 bp) and a small single-copy (SSC) region (19,708bp). The genome encodes 111 unique genes, consisting of 77 different protein-coding genes, 30 transfer RNA, and 4 ribosomal RNA genes, with 18 duplicated genes in the inverted repeats. Phylogenetic analysis indicates that is sister to , and the clade is closely related with .
是小檗科的一种濒危物种。在本研究中，我们组装了[物种名称]的叶绿体（cp）基因组，并基于完整的cp基因组重建了小檗科的系统发育树。[物种名称]的cp基因组长度为160,136 bp，由一对反向重复（IR）区域（26,424 bp）组成，这两个区域被一个大单拷贝（LSC）区域（87,580 bp）和一个小单拷贝（SSC）区域（19,708bp）隔开。该基因组编码111个独特基因，包括77个不同的蛋白质编码基因、30个转运RNA和4个核糖体RNA基因，其中18个基因在反向重复区域中重复。系统发育分析表明，[物种名称]与[另一物种名称]是姐妹关系，并且[某一进化枝名称]进化枝与[另一进化枝名称]密切相关。
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