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鉴定文峪河淡水沉积物中的缆菌及其对硫的生物地球化学影响。

Identification of cable bacteria and its biogeochemical impact on sulfur in freshwater sediments from the Wenyu River.

机构信息

State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, China; College of Water Sciences, Beijing Normal University, Beijing 100012, China.

State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Science, Beijing 100012, China.

出版信息

Sci Total Environ. 2021 May 15;769:144541. doi: 10.1016/j.scitotenv.2020.144541. Epub 2021 Jan 14.

Abstract

Cable bacteria are filamentous sulfur-oxidizing microorganisms that couple the reduction of oxygen or nitrate in surface sediments with the oxidation of free sulfide in deeper sediments by transferring electrons across centimeter scale distances. The distribution and activities of cable bacteria in freshwater sediments are still poorly understood, especially the impact of cable bacteria on sulfur cycling. The goal of this study was to investigate electrogenic sulfide oxidation associated with cable bacteria in laboratory microcosm incubations of freshwater sediments using microsensor technology, 16S full-length rRNA sequencing, and fluorescence in situ hybridization (FISH) microscopy. Their activity was characterized by a pH maximum of 8.56 in the oxic zone and the formation of a 13.7 ± 0.6 mm wide suboxic zone after 25 days of incubation. Full-length 16S rRNA gene sequences related to cable bacteria were recovered from the sediments and exhibited 93.3%-99.4% nucleotide (nt) similarities with those from other reported freshwater cable bacteria, indicating that new species of cable bacteria were present in the sediments. FISH analysis indicated that cable bacteria density increased with time, reaching a maximum of 95.48 m cm on day 50. The cells grew downwards to 40 mm but were mainly concentrated on the top 0-20 mm of sediment. The cable bacteria continuously consumed HS in deeper layers and oxidized sulfide into sulfate in the 0-20 mm surface layers, thereby affecting the sulfur cycling within sediments. These findings provide new evidence for the existence of higher diversity of cable bacteria in freshwater sediments than previously known.

摘要

缆线菌是一种丝状的硫氧化微生物,能够通过在厘米尺度上传递电子,将表层沉积物中氧气或硝酸盐的还原与深层沉积物中游离硫化物的氧化耦合起来。淡水沉积物中缆线菌的分布和活性仍知之甚少,尤其是缆线菌对硫循环的影响。本研究的目的是使用微传感器技术、16S 全长 rRNA 测序和荧光原位杂交(FISH)显微镜,研究淡水沉积物中与缆线菌相关的电生硫化物氧化作用。它们的活性特征为在好氧区 pH 值最大为 8.56,在培养 25 天后形成一个 13.7±0.6mm 宽的亚缺氧区。从沉积物中回收的与缆线菌相关的全长 16S rRNA 基因序列与其他报道的淡水缆线菌具有 93.3%-99.4%的核苷酸(nt)相似性,表明沉积物中存在新的缆线菌物种。FISH 分析表明,缆线菌的密度随时间增加,在第 50 天达到 95.48mcm 的最大值。细胞向下生长到 40mm,但主要集中在 0-20mm 的表层沉积物中。缆线菌在较深的地层中不断消耗 HS,并将硫化物氧化成硫酸盐,从而影响沉积物内部的硫循环。这些发现为淡水沉积物中缆线菌的多样性比以前所知的更高提供了新的证据。

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