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基于完整线粒体基因组序列的西伯利亚鼯鼠系统发育位置

Phylogenetic position of the Siberian flying squirrel based on complete mitochondrial genome sequences.

作者信息

Lim Sang Jin, Kim Ki Yoon, Kim Hye Ri, Chae Hee Mun, Park Yung Chul

机构信息

Division of Forest Science, College of Forest and Environmental Sciences, Kangwon National University, Chuncheon, Republic of Korea.

Ecosystem Research Division, National Park Research Institute, Korea National Park Service, Wonju, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2018 May 21;3(2):601-602. doi: 10.1080/23802359.2018.1473728.

DOI:10.1080/23802359.2018.1473728
PMID:33490522
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800334/
Abstract

The mitogenome of the Siberian flying squirrel is a circular molecule of 16,514 bp, consisting of a control region and a conserved set of 37 genes containing 13 protein-coding genes (PCGs), 22 tRNA genes, and 2 rRNA genes ( and ). The mitogenome of the Korean is AT-biased, with a nucleotide composition of 32.2% A, 30.4% T, 12.5% G, and 24.8% C. The phylogenetic analysis revealed that is well placed within the tribe Pteromyini (Sciuridae: Sciurinae), which forms a sister clade to the flying squirrels of the genus .

摘要

西伯利亚鼯鼠的线粒体基因组是一个16514 bp的环状分子,由一个控制区和一组保守的37个基因组成,其中包括13个蛋白质编码基因(PCGs)、22个tRNA基因和2个rRNA基因(以及)。朝鲜鼯鼠的线粒体基因组偏向于AT,其核苷酸组成为32.2%A、30.4%T、12.5%G和24.8%C。系统发育分析表明,朝鲜鼯鼠在鼯鼠族(松鼠科:松鼠亚科)中位置良好,该族与某属的鼯鼠形成姐妹进化枝。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae53/7800334/e24302dc031a/TMDN_A_1473728_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae53/7800334/e24302dc031a/TMDN_A_1473728_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae53/7800334/e24302dc031a/TMDN_A_1473728_F0001_B.jpg

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本文引用的文献

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Complete mitochondrial genome of the least weasel (Mustelidae) in Korea.韩国伶鼬(鼬科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2017 Oct 17;2(2):740-741. doi: 10.1080/23802359.2017.1372723.
2
Complete mitochondrial genome of the roe deer (Cervidae) from Korea.来自韩国的狍(鹿科)线粒体全基因组
Mitochondrial DNA B Resour. 2017 Aug 17;2(2):558-559. doi: 10.1080/23802359.2017.1365645.
3
Intraspecific comparison of two complete mitogenome sequences from the Korean water deer (Cervidae: Hydropotes inermis argyropus).
来自韩国水鹿(鹿科:獐狍)两个完整线粒体基因组序列的种内比较。
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4101-4103. doi: 10.3109/19401736.2014.1003863. Epub 2015 Jan 28.
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MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.MEGA6:分子进化遗传学分析版本 6.0。
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