Gale Grant A R, Wang Baojun, McCormick Alistair J
School of Biological Sciences, Institute of Molecular Plant Sciences, University of Edinburgh, Edinburgh, United Kingdom.
Centre for Synthetic and Systems Biology, University of Edinburgh, Edinburgh, United Kingdom.
Front Microbiol. 2021 Jan 15;11:624011. doi: 10.3389/fmicb.2020.624011. eCollection 2020.
Cyanobacteria utilize sunlight to convert carbon dioxide into a wide variety of secondary metabolites and show great potential for green biotechnology applications. Although cyanobacterial synthetic biology is less mature than for other heterotrophic model organisms, there are now a range of molecular tools available to modulate and control gene expression. One area of gene regulation that still lags behind other model organisms is the modulation of gene transcription, particularly transcription termination. A vast number of intrinsic transcription terminators are now available in heterotrophs, but only a small number have been investigated in cyanobacteria. As artificial gene expression systems become larger and more complex, with short stretches of DNA harboring strong promoters and multiple gene expression cassettes, the need to stop transcription efficiently and insulate downstream regions from unwanted interference is becoming more important. In this study, we adapted a dual reporter tool for use with the CyanoGate MoClo Assembly system that can quantify and compare the efficiency of terminator sequences within and between different species. We characterized 34 intrinsic terminators in , sp. PCC 6803, and UTEX 2973 and observed significant differences in termination efficiencies. However, we also identified five terminators with termination efficiencies of >96% in all three species, indicating that some terminators can behave consistently in both heterotrophic species and cyanobacteria.
蓝细菌利用阳光将二氧化碳转化为多种次生代谢产物,在绿色生物技术应用方面具有巨大潜力。尽管蓝细菌合成生物学不如其他异养模式生物成熟,但现在有一系列分子工具可用于调节和控制基因表达。在基因调控方面,仍落后于其他模式生物的一个领域是基因转录的调节,特别是转录终止。目前在异养生物中有大量的固有转录终止子,但在蓝细菌中仅研究了少数。随着人工基因表达系统变得越来越大且越来越复杂,带有强启动子的短DNA片段和多个基因表达盒,有效终止转录并使下游区域免受不必要干扰的需求变得越来越重要。在本研究中,我们将一种双报告工具应用于CyanoGate MoClo组装系统,该系统可以量化和比较不同物种内部和之间终止子序列的效率。我们对集胞藻属PCC 6803和聚球藻属UTEX 2973中的34个固有终止子进行了表征,并观察到终止效率存在显著差异。然而,我们还鉴定出五个在所有三个物种中终止效率均>96%的终止子,这表明一些终止子在异养生物和蓝细菌中都能表现出一致性。