Department of Medicine, Division of Human Genetics, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
Institute of Infectious Diseases and Molecular Medicine, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
Mol Genet Genomic Med. 2021 Mar;9(3):e1609. doi: 10.1002/mgg3.1609. Epub 2021 Feb 2.
Hearing impairment (HI) genes are poorly studied in African populations.
We used whole exome sequencing (WES) to investigate pathogenic and likely pathogenic (PLP) variants in 10 individuals with HI, from four multiplex families from Cameroon, two of which were previously unresolved with a targeted gene enrichment (TGE) panel of 116 genes. In silico protein modelling, western blotting and live imaging of transfected HEK293 cells were performed to study protein structure and functions.
All PLP variants previously identified with TGE were replicated. In one previously unresolved family, we found a homozygous frameshift PLP variant in GRXCR2 (OMIM: 615762), NM_001080516.1(GRXCR2):c.251delC p.(Ile85SerfsTer33), in two affected siblings; and additionally, in 1/80 unrelated individuals affected with non-syndromic hearing impairment (NSHI). The GRXCR2-c.251delC variant introduced a premature stop codon, leading to truncation and loss of a zinc-finger domain. Fluorescence confocal microscopy tracked the wild-type GRXCR2 protein to the cellular membrane, unlike the mutated GRXCR2 protein.
This study confirms GRXCR2 as a HI-associated gene. GRXCR2 should be included to the currently available TGE panels for HI diagnosis.
听力障碍(HI)基因在非洲人群中的研究较少。
我们使用全外显子组测序(WES)对来自喀麦隆的四个多重家族的 10 名 HI 个体的致病性和可能致病性(PLP)变体进行了研究,其中两个家族之前使用针对 116 个基因的靶向基因富集(TGE)面板未得到解决。我们进行了蛋白质结构和功能的计算机建模、western blot 和转染 HEK293 细胞的活细胞成像。
之前使用 TGE 鉴定的所有 PLP 变体均得到了复制。在一个之前未解决的家族中,我们发现了 GRXCR2(OMIM:615762)中的纯合移码 PLP 变体,NM_001080516.1(GRXCR2):c.251delC p.(Ile85SerfsTer33),在两个受影响的兄弟姐妹中;此外,在 1/80 个患有非综合征性听力障碍(NSHI)的无关个体中也发现了该变体。GRXCR2-c.251delC 变体引入了一个提前终止密码子,导致锌指结构域的截断和丢失。荧光共聚焦显微镜将野生型 GRXCR2 蛋白追踪到细胞膜,而突变型 GRXCR2 蛋白则不然。
本研究证实 GRXCR2 是一个与 HI 相关的基因。GRXCR2 应该被包含在目前用于 HI 诊断的 TGE 面板中。