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NRAP 中的双等位基因功能丧失是隐性扩张型心肌病的一个原因。

Biallelic loss-of-function in NRAP is a cause of recessive dilated cardiomyopathy.

机构信息

Blueprint Genetics, a Quest Diagnostics Company, Espoo, Finland.

Heart and Lung Center, Helsinki University Hospital, University of Helsinki, Helsinki, Finland.

出版信息

PLoS One. 2021 Feb 3;16(2):e0245681. doi: 10.1371/journal.pone.0245681. eCollection 2021.

Abstract

BACKGROUND

Familial dilated cardiomyopathy (DCM) is typically a monogenic disorder with dominant inheritance. Although over 40 genes have been linked to DCM, more than half of the patients undergoing comprehensive genetic testing are left without molecular diagnosis. Recently, biallelic protein-truncating variants (PTVs) in the nebulin-related anchoring protein gene (NRAP) were identified in a few patients with sporadic DCM.

METHODS AND RESULTS

We determined the frequency of rare NRAP variants in a cohort of DCM patients and control patients to further evaluate role of this gene in cardiomyopathies. A retrospective analysis of our internal variant database consisting of 31,639 individuals who underwent genetic testing (either panel or direct exome sequencing) was performed. The DCM group included 577 patients with either a confirmed or suspected DCM diagnosis. A control cohort of 31,062 individuals, including 25,912 individuals with non-cardiac (control group) and 5,150 with non-DCM cardiac indications (Non-DCM cardiac group). Biallelic (n = 6) or two (n = 5) NRAP variants (two PTVs or PTV+missense) were identified in 11 unrelated probands with DCM (1.9%) but none of the controls. None of the 11 probands had an alternative molecular diagnosis. Family member testing supports co-segregation. Biallelic or potentially biallelic NRAP variants were enriched in DCM vs. controls (OR 1052, p<0.0001). Based on the frequency of NRAP PTVs in the gnomAD reference population, and predicting full penetrance, biallelic NRAP variants could explain 0.25%-2.46% of all DCM cases.

CONCLUSION

Loss-of-function in NRAP is a cause for autosomal recessive dilated cardiomyopathy, supporting its inclusion in comprehensive genetic testing.

摘要

背景

家族性扩张型心肌病(DCM)通常是一种具有显性遗传的单基因疾病。尽管已经有 40 多个基因与 DCM 相关,但在接受全面基因检测的患者中,仍有一半以上没有得到分子诊断。最近,在一些散发性 DCM 患者中发现了 nebulin 相关锚定蛋白基因(NRAP)的双等位基因蛋白截断变异(PTV)。

方法和结果

我们在一组 DCM 患者和对照患者中确定了罕见 NRAP 变异的频率,以进一步评估该基因在心肌病中的作用。对我们的内部变异数据库进行了回顾性分析,该数据库由 31639 名接受基因检测(面板或直接外显子组测序)的个体组成。DCM 组包括 577 名经证实或疑似 DCM 诊断的患者。对照组包括 31062 名个体,其中 25912 名非心脏(对照组)和 5150 名非 DCM 心脏指征(非 DCM 心脏组)。在 11 名 DCM 无关先证者中发现了双等位基因(n = 6)或两个(n = 5)NRAP 变异(两个 PTV 或 PTV+错义)(1.9%),但对照组中均未发现。这 11 名先证者均无其他分子诊断。家系成员检测支持共分离。DCM 组中双等位基因或潜在双等位基因 NRAP 变异的富集程度高于对照组(OR 1052,p<0.0001)。根据 gnomAD 参考人群中 NRAP PTV 的频率,并预测完全外显率,双等位基因 NRAP 变异可解释所有 DCM 病例的 0.25%-2.46%。

结论

NRAP 的功能丧失是常染色体隐性扩张型心肌病的一个原因,支持其纳入全面基因检测。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fe2/7857588/6e66f0159830/pone.0245681.g001.jpg

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