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Identification of a Six-Gene Signature for Predicting the Overall Survival of Cervical Cancer Patients.

作者信息

Huo Xiao, Zhou Xiaoshuang, Peng Peng, Yu Mei, Zhang Ying, Yang Jiaxin, Cao Dongyan, Sun Hengzi, Shen Keng

机构信息

Medical Research Center, Peking University Third Hospital, Beijing,, People's Republic of China.

Department of Obstetrics and Gynecology, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, People's Republic of China.

出版信息

Onco Targets Ther. 2021 Feb 5;14:809-822. doi: 10.2147/OTT.S276553. eCollection 2021.


DOI:10.2147/OTT.S276553
PMID:33574675
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7873033/
Abstract

BACKGROUND: Although the incidence of cervical cancer has decreased in recent decades with the development of human papillomavirus vaccines and cancer screening, cervical cancer remains one of the leading causes of cancer-related death worldwide. Identifying potential biomarkers for cervical cancer treatment and prognosis prediction is necessary. METHODS: Samples with mRNA sequencing, copy number variant, single nucleotide polymorphism and clinical follow-up data were downloaded from The Cancer Genome Atlas database and randomly divided into a training dataset (N=146) and a test dataset (N=147). We selected and identified a prognostic gene set and mutated gene set and then integrated the two gene sets with the random survival forest algorithm and constructed a prognostic signature. External validation and immunohistochemical staining were also performed. RESULTS: We obtained 1416 differentially expressed prognosis-related genes, 624 genes with copy number amplification, 1038 genes with copy number deletion, and 163 significantly mutated genes. A total of 75 candidate genes were obtained after overlapping the differentially expressed genes and the genes with genomic variations. Subsequently, we obtained six characteristic genes through the random survival forest algorithm. The results showed that high expression of , and and low expression of and were associated with a poor prognosis in cervical cancer patients. We constructed a six-gene signature that can separate cervical cancer patients according to their different overall survival rates, and it showed robust performance for predicting survival (training set: ˂ 0.001, AUC = 0.82; testing set: ˂ 0.01, AUC = 0.59). CONCLUSION: Our study identified a novel six-gene signature and nomogram for predicting the overall survival of cervical cancer patients, which may be beneficial for clinical decision-making for individualized treatment.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/821dbcf5f18a/OTT-14-809-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/f36c106d7424/OTT-14-809-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/31ec4996bd5a/OTT-14-809-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/03fb6ea5c626/OTT-14-809-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/dc5079cb926c/OTT-14-809-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/99acb01cf6da/OTT-14-809-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/821dbcf5f18a/OTT-14-809-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/f36c106d7424/OTT-14-809-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/31ec4996bd5a/OTT-14-809-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/03fb6ea5c626/OTT-14-809-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/dc5079cb926c/OTT-14-809-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/99acb01cf6da/OTT-14-809-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b850/7873033/821dbcf5f18a/OTT-14-809-g0006.jpg

相似文献

[1]
Identification of a Six-Gene Signature for Predicting the Overall Survival of Cervical Cancer Patients.

Onco Targets Ther. 2021-2-5

[2]
Identification of a 6-gene signature for the survival prediction of breast cancer patients based on integrated multi-omics data analysis.

PLoS One. 2020-11-10

[3]
Identification of 5 Gene Signatures in Survival Prediction for Patients with Lung Squamous Cell Carcinoma Based on Integrated Multiomics Data Analysis.

Biomed Res Int. 2020

[4]
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[5]
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[6]
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Comb Chem High Throughput Screen. 2021

[7]
Identification of a Nine-Gene Signature and Establishment of a Prognostic Nomogram Predicting Overall Survival of Pancreatic Cancer.

Front Oncol. 2019-9-27

[8]
Identification of a novel six-gene signature with potential prognostic and therapeutic value in cervical cancer.

Cancer Med. 2021-10

[9]
Construction of a novel mRNA-signature prediction model for prognosis of bladder cancer based on a statistical analysis.

BMC Cancer. 2021-7-27

[10]
Identification of a tumor microenvironment-related gene signature to improve the prediction of cervical cancer prognosis.

Cancer Cell Int. 2021-3-25

引用本文的文献

[1]
that encodes organic cation transporter-3 is associated with prognosis and immunogenicity of human lung squamous cell carcinoma.

Transl Lung Cancer Res. 2023-10-31

[2]
The Relationship between Furin and Chronic Inflammation in the Progression of Cervical Intraepithelial Neoplasia to Cancer: A Cross-Sectional Study.

Cancers (Basel). 2023-10-7

[3]
Prediction of Cervical Cancer Outcome by Identifying and Validating a NAD+ Metabolism-Derived Gene Signature.

J Pers Med. 2022-12-8

[4]
CircRNA-Based Cervical Cancer Prognosis Model, Immunological Validation and Drug Prediction.

Curr Oncol. 2022-10-25

[5]
The proprotein convertase furin in cancer: more than an oncogene.

Oncogene. 2022-2

本文引用的文献

[1]
Identification of an autophagy-related gene signature for survival prediction in patients with cervical cancer.

J Ovarian Res. 2020-11-7

[2]
Development and Validation of an m6A RNA Methylation Regulator-Based Signature for Prognostic Prediction in Cervical Squamous Cell Carcinoma.

Front Oncol. 2020-8-21

[3]
Construction of an immune-related gene signature for prediction of prognosis in patients with cervical cancer.

Int Immunopharmacol. 2020-11

[4]
Epigenetic downregulation of desmin in gall bladder cancer reveals its potential role in disease progression.

Indian J Med Res. 2020-4

[5]
A five-mRNA signature associated with post-translational modifications can better predict recurrence and survival in cervical cancer.

J Cell Mol Med. 2020-6

[6]
Dysregulation of the miR-325-3p/DPAGT1 axis supports HBV-positive HCC chemoresistance.

Biochem Biophys Res Commun. 2019-9-10

[7]
Down-regulation of CCL17 in cancer-associated fibroblasts inhibits cell migration and invasion of breast cancer through ERK1/2 pathway.

Cancer Manag Res. 2019-8-7

[8]
Cervical Cancer: An Overview of Pathophysiology and Management.

Semin Oncol Nurs. 2019-3-14

[9]
Identification of a 26-lncRNAs Risk Model for Predicting Overall Survival of Cervical Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis.

DNA Cell Biol. 2019-1-30

[10]
Genetic variants in SLC22A3 contribute to the susceptibility to colorectal cancer.

Int J Cancer. 2019-1-3

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