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爪蟾来救援:验证和鉴定候选纤毛病基因的模型。

Xenopus to the rescue: A model to validate and characterize candidate ciliopathy genes.

机构信息

Department of Cell Biology, University of Virginia, Charlottesville, Virginia, USA.

Department of Biology, University of Virginia, Charlottesville, Virginia, USA.

出版信息

Genesis. 2021 Feb;59(1-2):e23414. doi: 10.1002/dvg.23414. Epub 2021 Feb 12.

DOI:10.1002/dvg.23414
PMID:33576572
Abstract

Cilia are present on most vertebrate cells and play a central role in development, growth, and homeostasis. Thus, cilia dysfunction can manifest into an array of diseases, collectively termed ciliopathies, affecting millions of lives worldwide. Yet, our understanding of the gene regulatory networks that control cilia assembly and functions remain incomplete. With the advances in next-generation sequencing technologies, we can now rapidly predict pathogenic variants from hundreds of ciliopathy patients. While the pace of candidate gene discovery is exciting, most of these genes have never been previously implicated in cilia assembly or function. This makes assigning the disease causality difficult. This review discusses how Xenopus, a genetically tractable and high-throughput vertebrate model, has played a central role in identifying, validating, and characterizing candidate ciliopathy genes. The review is focused on multiciliated cells (MCCs) and diseases associated with MCC dysfunction. MCCs harbor multiple motile cilia on their apical surface to generate extracellular fluid flow inside the airway, the brain ventricles, and the oviduct. In Xenopus, these cells are external and present on the embryonic epidermal epithelia, facilitating candidate genes analysis in MCC development in vivo. The ability to introduce patient variants to study their effects on disease progression makes Xenopus a powerful model to improve our understanding of the underlying disease mechanisms and explain the patient phenotype.

摘要

纤毛存在于大多数脊椎动物细胞中,在发育、生长和内稳态中发挥核心作用。因此,纤毛功能障碍可能表现为一系列疾病,统称为纤毛病,影响着全球数百万人的生命。然而,我们对控制纤毛组装和功能的基因调控网络的理解仍然不完整。随着下一代测序技术的进步,我们现在可以从数百名纤毛病患者中快速预测致病变异。虽然候选基因发现的速度令人兴奋,但这些基因中的大多数以前从未被牵连到纤毛组装或功能中。这使得确定疾病的因果关系变得困难。这篇综述讨论了非洲爪蟾在鉴定、验证和表征候选纤毛病基因方面是如何发挥核心作用的,非洲爪蟾是一种遗传上易于处理和高通量的脊椎动物模型。综述集中在多纤毛细胞(MCC)和与 MCC 功能障碍相关的疾病上。MCC 在其顶端表面上具有多个运动纤毛,以在气道、脑脑室和输卵管内产生细胞外液流。在非洲爪蟾中,这些细胞位于外部,存在于胚胎表皮上皮上,便于在体内研究 MCC 发育过程中的候选基因分析。将患者变异引入研究其对疾病进展影响的能力使非洲爪蟾成为一种强大的模型,可以提高我们对潜在疾病机制的理解,并解释患者表型。

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Xenopus to the rescue: A model to validate and characterize candidate ciliopathy genes.爪蟾来救援:验证和鉴定候选纤毛病基因的模型。
Genesis. 2021 Feb;59(1-2):e23414. doi: 10.1002/dvg.23414. Epub 2021 Feb 12.
2
Aquatic models of human ciliary diseases.人类纤毛疾病的水生模型。
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What we can learn from a tadpole about ciliopathies and airway diseases: Using systems biology in Xenopus to study cilia and mucociliary epithelia.我们能从蝌蚪身上了解到的关于纤毛病和气道疾病的知识:利用非洲爪蟾的系统生物学研究纤毛和黏液纤毛上皮。
Genesis. 2017 Jan;55(1-2). doi: 10.1002/dvg.23001.
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Zebrafish as a Model for Human Ciliopathies.斑马鱼作为人类纤毛病的模型。
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Protein localization screening reveals novel regulators of multiciliated cell development and function.蛋白定位筛选揭示了调控多纤毛细胞发育和功能的新调节因子。
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ATP4a is required for development and function of the Xenopus mucociliary epidermis - a potential model to study proton pump inhibitor-associated pneumonia.非洲爪蟾黏液纤毛表皮的发育和功能需要ATP4a,这是一种研究质子泵抑制剂相关性肺炎的潜在模型。
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Xenopus epidermal and endodermal epithelia as models for mucociliary epithelial evolution, disease, and metaplasia.非洲爪蟾表皮和内胚层上皮作为粘液纤毛上皮进化、疾病和化生的模型。
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Formation and function of multiciliated cells.纤毛细胞的形成与功能。
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Divergent roles of the Wnt/PCP Formin Daam1 in renal ciliogenesis.Wnt/PCP 形态发生因子 Daam1 在肾脏纤毛发生中的不同作用。
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Nat Commun. 2025 Jul 1;16(1):5701. doi: 10.1038/s41467-025-61005-8.
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Genomic Complexity of in : Implications for CRISPR Targeting and Disease Modeling.[物种名称]的基因组复杂性:对CRISPR靶向和疾病建模的影响
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Convergence of autism proteins at the cilium.自闭症相关蛋白在纤毛处的汇聚。
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Microridge-like structures anchor motile cilia.微脊状结构锚定运动纤毛。
Nat Commun. 2022 Apr 19;13(1):2056. doi: 10.1038/s41467-022-29741-3.
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PCD Genes-From Patients to Model Organisms and Back to Humans.PCD 基因——从患者到模式生物,再回到人类。
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An updated SYSCILIA gold standard (SCGSv2) of known ciliary genes, revealing the vast progress that has been made in the cilia research field.一个经过更新的 SYSCILIA 金标准(SCGSv2),其中包含已知的纤毛基因,揭示了在纤毛研究领域取得的巨大进展。
Mol Biol Cell. 2021 Dec 1;32(22):br13. doi: 10.1091/mbc.E21-05-0226. Epub 2021 Oct 6.