Pánek Matěj, Střížková Ivana, Zouhar Miloslav, Kudláček Tomáš, Tomšovský Michal
Crop Research Institute, Team of Ecology and Diagnostics of Fungal Plant Pathogens, Drnovská 507/73, 161 06 Praha, Czech Republic.
Department of Plant Protection, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences in Prague, Kamýcká 129, 165 00 Praha, Czech Republic.
Microorganisms. 2021 Feb 10;9(2):345. doi: 10.3390/microorganisms9020345.
A population study of was performed using ddRADseq sequence variation analysis completed by the analysis of effector genes-RXLR6, RXLR7 and SCR113. The population structure was described by F-statistics, heterozygosity, nucleotide diversity, number of private alleles, number of polymorphic sites, kinship coefficient and structure analysis. The population of in Europe seems to be structured into host-associated groups. The isolates from woody hosts are structured into four groups described previously, while isolates from strawberry form another group. The groups are diverse in effector gene composition and the frequency of outbreeding. When populations from strawberry were analysed, both asexual reproduction and occasional outbreeding confirmed by gene flow among distinct populations were detected. Therefore, distinct populations differ in the level of heterozygosity. The data support the theory of the mixed-mating model for , comprising frequent asexual behaviour and inbreeding alternating with occasional outbreeding. Because is not indigenous to Europe, such variability is probably caused by multiple introductions of different lineages from the area of its original distribution, and the different histories of sexual recombination and host adaptation of particular populations.
使用通过效应基因RXLR6、RXLR7和SCR113分析完成的ddRADseq序列变异分析对[具体研究对象]进行了群体研究。群体结构通过F统计量、杂合度、核苷酸多样性、私有等位基因数量、多态性位点数量、亲缘系数和结构分析来描述。欧洲的[具体研究对象]群体似乎被构建成宿主相关群体。来自木本宿主的分离株被构建成先前描述的四个群体,而来自草莓的分离株形成另一个群体。这些群体在效应基因组成和远交频率方面存在差异。当分析来自草莓的群体时,检测到了无性繁殖以及不同群体间基因流所证实的偶尔远交。因此,不同的[具体研究对象]群体在杂合度水平上存在差异。数据支持了[具体研究对象]的混合交配模型理论,该模型包括频繁的无性行为和近亲繁殖,偶尔伴有远交。由于[具体研究对象]并非欧洲本土物种,这种变异性可能是由来自其原始分布区域的不同谱系的多次引入,以及特定群体有性重组和宿主适应的不同历史所导致的。