• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

理解抑制剂与 Bla1 β-内酰胺酶的分子相互作用,以揭示抗菌耐药性的机制。

Understanding the molecular interactions of inhibitors against Bla1 beta-lactamase towards unraveling the mechanism of antimicrobial resistance.

机构信息

Department of Biotechnology, Indian Institute of Technology Roorkee, Roorkee 247667, India.

Laboratory for Structural Bioinformatics, Center for Biosystems Dynamics Research, RIKEN, Yokohama, Kanagawa 230-0045, Japan.

出版信息

Int J Biol Macromol. 2021 Apr 30;177:337-350. doi: 10.1016/j.ijbiomac.2021.02.069. Epub 2021 Feb 11.

DOI:10.1016/j.ijbiomac.2021.02.069
PMID:33582216
Abstract

This study evaluated the inhibitory potential of various beta-lactamase inhibitors such as mechanism-based inhibitors (MBIs), carbapenems, monobactam, and non-beta-lactam inhibitors against Bla1, a class-A beta-lactamase encoded by Bacillus anthracis. The binding potential of different inhibitors was estimated using competitive kinetic assay, isothermal titration calorimetry, and Biolayer interferometry. We observed that tazobactam has better inhibition among other MBIs with a characteristics inhibition dissociation constant of 0.51 ± 0.13 μM. Avibactam was also identified as good inhibitor with an inhibition efficiency of 0.6 ± 0.04 μM. All the MBIs (K = 1.90E-04 M, 2.05E-05 M, 3.55E-04 M for clavulanate, sulbactam and tazobactam) showed significantly better binding potential than carbapenems (K = 1.02E-03 M, 2.74E-03 M, 1.24E-03 M for ertapenem, imipenem and biapenem respectively). Molecular dynamics simulations were carried out using Bla1-inhibitor complexes to understand the dynamics and stability. The minimum inhibitory concentration (MIC) was carried out by taking various substrates and inhibitors, and later it was followed by cell viability assay. Together, our study helps develop a proper understanding of Bla1 beta-lactamase and its interaction with inhibitory molecules. This study would facilitate comprehending the catalytic divergence of beta-lactamases and the newly emergent resistant strains, focusing on the new generation of therapeutics being less prone to antimicrobial resistance.

摘要

本研究评估了各种β-内酰胺酶抑制剂的抑制潜力,如机制抑制剂(MBIs)、碳青霉烯类、单环β-内酰胺类和非β-内酰胺类抑制剂,针对炭疽杆菌编码的 A 类β-内酰胺酶 Bla1。使用竞争动力学测定、等温滴定量热法和生物层干涉法估计了不同抑制剂的结合潜力。我们观察到他唑巴坦在其他 MBIs 中具有更好的抑制作用,其特征抑制解离常数为 0.51 ± 0.13 μM。阿维巴坦也被鉴定为具有良好抑制作用的抑制剂,抑制效率为 0.6 ± 0.04 μM。所有 MBIs(克拉维酸、舒巴坦和他唑巴坦的 K 值分别为 1.90E-04 M、2.05E-05 M 和 3.55E-04 M)显示出比碳青霉烯类(厄他培南、亚胺培南和比阿培南的 K 值分别为 1.02E-03 M、2.74E-03 M 和 1.24E-03 M)更好的结合潜力。使用 Bla1-抑制剂复合物进行分子动力学模拟,以了解动力学和稳定性。通过使用各种底物和抑制剂进行最低抑菌浓度(MIC)测定,随后进行细胞活力测定。总之,我们的研究有助于对 Bla1 内酰胺酶及其与抑制分子的相互作用有一个正确的认识。这项研究将有助于理解β-内酰胺酶的催化差异和新出现的耐药菌株,重点是新一代治疗药物不易产生抗微生物耐药性。

相似文献

1
Understanding the molecular interactions of inhibitors against Bla1 beta-lactamase towards unraveling the mechanism of antimicrobial resistance.理解抑制剂与 Bla1 β-内酰胺酶的分子相互作用,以揭示抗菌耐药性的机制。
Int J Biol Macromol. 2021 Apr 30;177:337-350. doi: 10.1016/j.ijbiomac.2021.02.069. Epub 2021 Feb 11.
2
An insight into the complete biophysical and biochemical characterization of novel class A beta-lactamase (Bla1) from Bacillus anthracis.深入了解炭疽芽孢杆菌新型 A 类β-内酰胺酶(Bla1)的完整物理化学和生物化学特性。
Int J Biol Macromol. 2020 Feb 15;145:510-526. doi: 10.1016/j.ijbiomac.2019.12.136. Epub 2019 Dec 23.
3
Evaluation of penicillin-based inhibitors of the class A and B beta-lactamases from Bacillus anthracis.炭疽芽孢杆菌A类和B类β-内酰胺酶的基于青霉素的抑制剂的评估。
Biochem Biophys Res Commun. 2004 Jan 16;313(3):541-5. doi: 10.1016/j.bbrc.2003.11.158.
4
Imipenem-Relebactam and Meropenem-Vaborbactam: Two Novel Carbapenem-β-Lactamase Inhibitor Combinations.亚胺培南-西司他丁钠和美罗培南-法硼巴坦:两种新型碳青霉烯-β-内酰胺酶抑制剂复方制剂。
Drugs. 2018 Jan;78(1):65-98. doi: 10.1007/s40265-017-0851-9.
5
Analysis of the binding forces driving the tight interactions between beta-lactamase inhibitory protein-II (BLIP-II) and class A beta-lactamases.β-内酰胺酶抑制蛋白-II(BLIP-II)与 A 类β-内酰胺酶之间紧密相互作用的结合力分析。
J Biol Chem. 2011 Sep 16;286(37):32723-35. doi: 10.1074/jbc.M111.265058. Epub 2011 Jul 20.
6
Elucidating the Molecular Basis of Avibactam-Mediated Inhibition of Class A β-Lactamases.阐明阿维巴坦介导的 A 类β-内酰胺酶抑制的分子基础。
Chemistry. 2020 Aug 3;26(43):9639-9651. doi: 10.1002/chem.202001261. Epub 2020 Jul 9.
7
Durlobactam, a Diazabicyclooctane β-Lactamase Inhibitor, Inhibits BlaC and Peptidoglycan Transpeptidases of .杜拉西林,一种二氮杂二环辛烷β-内酰胺酶抑制剂,抑制blaC 和. 的肽聚糖转肽酶。
ACS Infect Dis. 2024 May 10;10(5):1767-1779. doi: 10.1021/acsinfecdis.4c00119. Epub 2024 Apr 15.
8
Mechanism of proton transfer in class A β-lactamase catalysis and inhibition by avibactam.A 类β-内酰胺酶催化质子转移机制及抑制剂阿维巴坦的抑制作用。
Proc Natl Acad Sci U S A. 2020 Mar 17;117(11):5818-5825. doi: 10.1073/pnas.1922203117. Epub 2020 Mar 2.
9
New Conformations of Acylation Adducts of Inhibitors of β-Lactamase from Mycobacterium tuberculosis.结核分枝杆菌β-内酰胺酶抑制剂的酰化加合物的新构象。
Biochemistry. 2019 Feb 19;58(7):997-1009. doi: 10.1021/acs.biochem.8b01085. Epub 2019 Jan 30.
10
Molecular insights into avibactam mediated class C β-lactamase inhibition: competition between reverse acylation and hydrolysis through desulfation.通过脱硫作用,反酰化和水解之间的竞争:洞察阿维巴坦介导的 C 类β-内酰胺酶抑制的分子机制。
Phys Chem Chem Phys. 2018 May 30;20(21):14482-14490. doi: 10.1039/c8cp01670d.

引用本文的文献

1
Structural insight into the binding mode of cefotaxime and meropenem to TEM-1, SHV-1, KPC-2, and Amp-C type beta-lactamases.头孢噻肟和美罗培南与 TEM-1、SHV-1、KPC-2 和 Amp-C 型β内酰胺酶结合模式的结构见解。
Cell Biochem Biophys. 2024 Jun;82(2):1299-1308. doi: 10.1007/s12013-024-01284-y. Epub 2024 May 10.
2
Characterization of a Class A β-Lactamase from (Ftu-1) Belonging to a Unique Subclass toward Understanding AMR.来自(Ftu-1)的A类β-内酰胺酶的特性分析,该酶属于一个独特的亚类,有助于理解抗菌药物耐药性。
ACS Bio Med Chem Au. 2023 Feb 8;3(2):174-188. doi: 10.1021/acsbiomedchemau.2c00044. eCollection 2023 Apr 19.
3
Synthesis of Dihydrobenzofuro[3,2-b]chromenes as Potential 3CLpro Inhibitors of SARS-CoV-2: A Molecular Docking and Molecular Dynamics Study.
二氢苯并呋喃[3,2-b]色烯的合成作为 SARS-CoV-2 的潜在 3CLpro 抑制剂:分子对接和分子动力学研究。
ChemMedChem. 2022 Apr 20;17(8):e202100782. doi: 10.1002/cmdc.202100782. Epub 2022 Feb 17.