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来自非洲南部干旱林地未驯化灌木的根瘤根瘤菌可使安哥拉柚木结瘤,安哥拉柚木是一种重要的木材来源。

Root Nodule Rhizobia From Undomesticated Shrubs of the Dry Woodlands of Southern Africa Can Nodulate Angolan Teak , an Important Source of Timber.

作者信息

Bünger Wiebke, Sarkar Abhijit, Grönemeyer Jann Lasse, Zielinski Janina, Revermann Rasmus, Hurek Thomas, Reinhold-Hurek Barbara

机构信息

Department of Microbe-Plant Interactions, CBIB (Center for Biomolecular Interactions Bremen), Faculty Biology and Chemistry, University of Bremen, Bremen, Germany.

Department of Biodiversity, Ecology and Evolution of Plants, Institute of Plant Science and Microbiology, University of Hamburg, Hamburg, Germany.

出版信息

Front Microbiol. 2021 Jan 28;12:611704. doi: 10.3389/fmicb.2021.611704. eCollection 2021.

Abstract

, a leguminous tree native to the dry woodlands of Southern Africa, provides valuable timber, but is threatened by land conversion and overharvesting while showing limited natural regeneration. Nitrogen-fixing root nodule symbionts that could improve establishment of young seedlings have not yet been described. Therefore, we investigated the ability of to form nodules with a diverse range of rhizobia. In drought-prone areas under climate change with higher temperatures, inoculants that are heat-tolerant and adapted to these conditions are likely to be of advantage. Sources of bacterial isolates were roots of from nurseries in the Kavango region, other shrubs from this area growing near such as , , sp., or shrubs from drought-prone areas in Namaqualand (, ) or Kalahari (). Only slight protrusions were observed on roots, from which a non-nodulating sp. was isolated. Rhizobia that were isolated from nodules of other shrubs were affiliated to WR4, spp. (WR23/WR74/WR93/WR96), or (WR41/WR52). As many plant growth-promoting rhizobacteria (PGPR), nodule isolates produced siderophores and solubilized phosphate. Among them, only the strains nodulated under controlled conditions in the laboratory. Isolates were further characterized by multilocus sequence analysis and were found to be distant from known species. Among additional reference species tested for nodulation on , 7-2 and 5-10 from the Kavango region of Namibia as well as LMG6234 and LMG21728 induced nitrogen-fixing nodules, while USDA110 and SEMIA6148 did not. This suggests a broad microsymbiont range from and lineages. Phylogenetic analysis of genes indicated that nodulating bradyrhizobia did not belong to a specific symbiovar. Also, for and , nodule isolates WR4 or sp. WR52, respectively, were authenticated. Characterization of symbionts inducing effective root nodules in and other shrubs from Subsahara Africa (SSA) give insights in their symbiotic partners for the first time and might help in future to develop bioinoculants for young seedlings in nurseries, and for reforestation efforts in Southern Africa.

摘要

[一种原产于南部非洲干旱林地的豆科树木]提供了有价值的木材,但受到土地转换和过度采伐的威胁,同时自然更新能力有限。尚未描述过能改善幼苗定植的固氮根瘤共生体。因此,我们研究了[该树木]与多种根瘤菌形成根瘤的能力。在气候变化导致气温升高的干旱易发地区,耐热且适应这些条件的接种剂可能具有优势。细菌分离株的来源是卡万戈地区苗圃中[该树木]的根、该地区生长在[该树木]附近的其他灌木,如[其他树种1]、[其他树种2]、[其他树种3]种,或纳米比亚纳马夸兰([当地树种1]、[当地树种2])或卡拉哈里([当地树种3])干旱易发地区的灌木。在[该树木]的根上仅观察到轻微突起,从中分离出一种不结瘤的[某菌种]。从其他灌木根瘤中分离出的根瘤菌隶属于[根瘤菌属WR4]、[慢生根瘤菌属]种(WR23/WR74/WR93/WR96)或[中华根瘤菌属](WR41/WR52)。与许多植物促生根际细菌(PGPR)一样,根瘤分离株产生铁载体并溶解磷酸盐。其中,只有[某菌株]在实验室控制条件下能使[该树木]结瘤。分离株通过多位点序列分析进一步表征,发现与已知的[该树木相关根瘤菌]物种距离较远。在测试的用于[该树木]结瘤的其他参考物种中,纳米比亚卡万戈地区的[根瘤菌7 - 2]和[根瘤菌5 - 10]以及[慢生根瘤菌LMG6234]和[中华根瘤菌LMG21728]诱导形成了固氮根瘤,而[大豆根瘤菌USDA110]和[慢生根瘤菌SEMIA6148]则不能。这表明[该树木]有来自[根瘤菌属]和[慢生根瘤菌属]谱系的广泛微共生体范围。对[结瘤相关基因]的系统发育分析表明,结瘤慢生根瘤菌不属于特定的共生变种。此外,对于[该树木]和[其他树种],分别鉴定出根瘤分离株[根瘤菌属WR4]或[中华根瘤菌属]种WR52。对在[该树木]和撒哈拉以南非洲(SSA)其他灌木中诱导有效根瘤的共生体的表征首次揭示了它们的共生伙伴,可能有助于未来为苗圃中的幼苗开发生物接种剂以及在南部非洲进行重新造林工作。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cb2b/7876412/9db4b14df8aa/fmicb-12-611704-g002.jpg

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