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使用二维电泳和基质辅助激光解吸电离飞行时间质谱对响应不同pH值的蛋白质组进行分析。

Proteomic analysis of in response to different pHs using two-dimensional electrophoresis and MALDI TOF mass spectroscopy.

作者信息

Dadfarma Narges, Karimi Golgis, Nowroozi Jamileh, Nejadi Naser, Kazemi Bahram, Bandehpour Mojgan

机构信息

Department of Microbiology, North Tehran Branch, Islamic Azad University, Tehran, Iran.

Cellular and Molecular Biology Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

出版信息

Iran J Microbiol. 2020 Oct;12(5):431-436. doi: 10.18502/ijm.v12i5.4604.

Abstract

BACKGROUND AND OBJECTIVES

, an acid-resistant bacterium, has a protective role against the pathogens. So we aimed to determine the proteome of ATCC39392 strain in response to different pHs of 5 and 7 using proteomic analysis.

MATERIALS AND METHODS

Supernatant and bacterial extraction of ATCC39392 adapts at pHs 5 and 7 were isolated using sodium dodecyl sulfate-polyacrylamide gel and two-dimensional gel electrophoresis. The comparison of results showed that 7 protein spots were seen in pH 5 but not in pH 7. Afterward, they were excised and sent for Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) to be identified.

RESULTS

Seven different proteins (four secretory and three structural) with different roles in human body health were identified. Prescribed proteins include putative cell wall associated Hydrolase, Glycoside Hydrolase, beta-N-Acetyl hexosaminidase, Histidine Kinase, Chaperonin, metal dependent Hydrolase and Lysozyme.

CONCLUSION

Seven isolated proteins with anti-cancer and digestive impresses are proper subjects in therapy or drug delivery approaches especially oral drug usage for protection against stomach acidic area.

摘要

背景与目的

一种耐酸细菌对病原体具有保护作用。因此,我们旨在通过蛋白质组学分析确定嗜热栖热放线菌ATCC39392菌株在pH值为5和7时的蛋白质组。

材料与方法

使用十二烷基硫酸钠-聚丙烯酰胺凝胶和二维凝胶电泳分离嗜热栖热放线菌ATCC39392在pH值为5和7时适应后的上清液和细菌提取物。结果比较显示,在pH值为5时可见7个蛋白斑点,而在pH值为7时未见。随后,将它们切下并送去进行基质辅助激光解吸/电离飞行时间质谱分析(MALDI-TOF MS)以进行鉴定。

结果

鉴定出七种在人体健康中具有不同作用的不同蛋白质(四种分泌型和三种结构型)。指定的蛋白质包括假定的细胞壁相关水解酶、糖苷水解酶、β-N-乙酰己糖胺酶、组氨酸激酶、伴侣蛋白、金属依赖性水解酶和溶菌酶。

结论

七种分离出的具有抗癌和消化作用的蛋白质是治疗或药物递送方法中合适的研究对象,尤其是用于保护胃酸性区域的口服药物使用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2502/7867702/8ae33ece1fd3/IJM-12-431-g001.jpg

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