Research Center for Analytical Sciences, College of Chemistry, Nankai University, Tianjin 300071, PR China.
Research Center for Analytical Sciences, College of Chemistry, Nankai University, Tianjin 300071, PR China; Tianjin Key Laboratory of Biosensing and Molecular Recognition, Tianjin 300071, PR China.
Spectrochim Acta A Mol Biomol Spectrosc. 2021 May 15;253:119573. doi: 10.1016/j.saa.2021.119573. Epub 2021 Feb 13.
Regulating the folding state by denaturants is essential for the structure and function of proteins. Poly(N-isopropyl acrylamide) (PNIPAM) is usually regarded as a model for protein denaturation. The effects of urea, as a denaturant, on the aggregations of PNIPAM was studied by temperature-dependent near-infrared (NIR) spectroscopy, and particularly the variation of water structures was analyzed. The NIR spectra of the polymer-urea solutions containing different polymer concentrations were measured at different temperatures. N-way principal component analysis (NPCA) was performed to observe the spectral information. Three principal components (PCs) containing the spectral information of CH groups were obtained, showing three kinds of CH in the system. Obvious dehydration of the three CH groups occurs at 27.5 °C in solution, but the temperature turns to 27 °C for two kinds of the CH and 26.5 °C for the third one, respectively, in the urea-add solution. The effect of urea on the formation of the intramolecular hydrogen bonds that promotes polymer folding is suggested. The spectral information of NH in urea molecule indicates that the direct interaction of urea and polymer facilitates the stability of the polymer globule state. Furthermore, the spectral information of OH shows that the release of the water molecules with three hydrogen bonds (S), which may connect the NH and CO groups in PNIPAM in solution, leads to the phase transition. When urea is added, urea may reduce the content of the S water to facilitate the release, making the phase transition at a low temperature.
变性剂调节蛋白质的折叠状态对于其结构和功能至关重要。聚(N-异丙基丙烯酰胺)(PNIPAM)通常被视为蛋白质变性的模型。通过温度依赖的近红外(NIR)光谱研究了脲作为变性剂对 PNIPAM 聚集的影响,并特别分析了水结构的变化。在不同温度下测量了含有不同聚合物浓度的聚合物-脲溶液的 NIR 光谱。进行了 N 向主成分分析(NPCA)以观察光谱信息。获得了包含 CH 基团光谱信息的三个主成分(PC),表明系统中有三种 CH。在溶液中,在 27.5°C 时明显发生了三种 CH 的去水作用,但在脲添加溶液中,两种 CH 的温度变为 27°C,第三种 CH 的温度变为 26.5°C。脲对促进聚合物折叠的分子内氢键形成的影响表明,脲分子中 NH 的光谱信息表明脲与聚合物的直接相互作用促进了聚合物球状体状态的稳定性。此外,OH 的光谱信息表明,可能连接 PNIPAM 中 NH 和 CO 基团的具有三个氢键的 S 水分子的释放导致相转变。当加入脲时,脲可能会降低 S 水的含量,从而促进释放,使相转变在低温下发生。