Key Laboratory of Bio-resources and Eco-environment, Ministry of Education, College of Life Science, Sichuan University, No. 24 South Section 1, Yihuan Road, Chengdu, 610065, Sichuan, China.
Key Laboratory of State Forestry and Grassland Administration on Conservation Biology of Rare Animals in The Giant Panda National Park, China Conservation and Research Center for the Giant Panda, Dujiangyan, 611830, Sichuan, PR China.
BMC Genomics. 2021 Feb 28;22(1):143. doi: 10.1186/s12864-021-07456-x.
The giant panda (Ailuropoda melanoleuca) is a threatened endemic Chinese species and a flagship species of national and global conservation concern. Life history theory proposes that reproduction and immunity can be mutually constraining and interrelated. Knowledge of immunity changes of male giant pandas during the breeding season is limited.
Here, we researched peripheral blood gene expression profiles associated with immunity. Thirteen captive giant pandas, ranging from 9 to 11 years old, were divided into two groups based on their reproductive status. We identified 318 up-regulated DEGs and 43 down-regulated DEGs, which were enriched in 87 GO terms and 6 KEGG pathways. Additionally, we obtained 45 immune-related genes with altered expression, mostly up-regulated, and identified four hub genes HSPA4, SUGT1, SOD1, and IL1B in PPI analysis. These 45 genes were related to pattern recognition receptors, autophagy, peroxisome, proteasome, natural killer cell, antigen processing and presentation. SUGT1 and IL1B were related to pattern recognition receptors. HSP90AA1 was the most up-regulated gene and is a member of heat shock protein 90 family. HSP90 contributes to the translocation of extracellular antigen. KLRD1 encodes CD94, whose complex is an inhibitor of the cytotoxic activity of NK cells, was down-regulated. IGIP, which has the capability of inducing IgA production by B cells, was down-regulated, suggesting low concentration of IgA in male giant pandas. Our results suggest that most immune-related genes were up-regulated and more related to innate immune than adaptive immune.
Our results indicated that breeding male giant pandas presented an immunoenhancement in innate immunity, enhanced antigen presentation and processing in cellular immunity compared to non-breeding males. The humoral immunity of male giant pandas may show a tendency to decrease during the breeding season. This study will provide a foundation for further studies of immunity and reproduction in male giant pandas.
大熊猫(Ailuropoda melanoleuca)是一种受到威胁的中国特有物种,也是国家和全球保护关注的旗舰物种。生活史理论提出,繁殖和免疫可以相互制约和相互关联。关于雄性大熊猫繁殖季节免疫变化的知识有限。
在这里,我们研究了与免疫相关的外周血基因表达谱。根据繁殖状态,将 13 只 9 至 11 岁的圈养大熊猫分为两组。我们鉴定了 318 个上调的 DEGs 和 43 个下调的 DEGs,这些基因富集在 87 个 GO 术语和 6 个 KEGG 途径中。此外,我们获得了 45 个表达改变的免疫相关基因,大多数上调,并在 PPI 分析中鉴定出 4 个关键基因 HSPA4、SUGT1、SOD1 和 IL1B。这些 45 个基因与模式识别受体、自噬、过氧化物酶体、蛋白酶体、自然杀伤细胞、抗原加工和呈递有关。SUGT1 和 IL1B 与模式识别受体有关。HSP90AA1 是上调最明显的基因,是热休克蛋白 90 家族的成员。HSP90 有助于外源性抗原的易位。编码 CD94 的 KLRD1 复合物是 NK 细胞细胞毒性活性的抑制剂,其表达下调。具有诱导 B 细胞产生 IgA 能力的 IGIP 表达下调,提示雄性大熊猫 IgA 浓度较低。我们的结果表明,大多数免疫相关基因上调,与先天免疫比适应性免疫更相关。
与非繁殖雄性大熊猫相比,繁殖雄性大熊猫在先天免疫中表现出免疫增强,在细胞免疫中增强抗原呈递和加工。雄性大熊猫的体液免疫在繁殖季节可能呈下降趋势。本研究将为进一步研究雄性大熊猫的免疫和繁殖提供基础。