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骨钙素是肥厚型心肌病的潜在遗传靶点。

Osteomodulin is a Potential Genetic Target for Hypertrophic Cardiomyopathy.

机构信息

Laboratory of Heart Center, Zhujiang Hospital, Southern Medical University, No. 253 Industrial Boulevard Central, Guangzhou, 510000, Guangdong, China.

Guangdong Provincial Biomedical Engineering Technology Research Center for Cardiovascular Disease, No. 253 Industrial Boulevard Central, Guangzhou, 510000, Guangdong, China.

出版信息

Biochem Genet. 2021 Oct;59(5):1185-1202. doi: 10.1007/s10528-021-10050-1. Epub 2021 Mar 14.

Abstract

Hypertrophic cardiomyopathy (HCM) is one of the most common genetic heart diseases. Its features include abnormal cardiomyocyte hypertrophy, microvascular dysfunction, and increased accumulation of intercellular matrix. We aim to unravel genes associated with the pathogenesis of HCM and provide a potential target for diagnosis and treatment. Key modules were identified by weighted gene co-expression network analysis (WGCNA). A miRNA-mRNA network was constructed with the predicted miRNA and the most likely hub gene was screened out for gene set enrichment analysis (GSEA). The diagnostic capacity of hub gene was verified by receiver operating characteristic (ROC) curves. Single-cell sequencing (sc-RNA seq) data of normal adult hearts were used to further predict the specific cell types expressing the hub gene. WGCNA assigned genes into different modules and found that the genes contained in the red module had the strongest positive correlation with HCM disease. 2.5% of the genes were common between DEG and hub genes. With the miRNA-mRNA network, osteomodulin (OMD) was identified as the most potential hub gene. GSEA showed that OMD was mainly involved in the synthesis of extracellular matrix and had a certain inhibitory effect on the immune system. The expression of OMD in HCM was validated and ROC curve analysis showed that OMD could distinguish HCM from controls with the area under the curve (AUC) > 0.7. The sc-RNA seq revealed that OMD was mainly expressed in the later stages of cardiac fibroblasts, suggesting that OMD may have an effect on fibroblasts, participating in the pathogenesis of HCM. OMD may serve as a biomarker and therapeutic target for HCM in the future.

摘要

肥厚型心肌病(HCM)是最常见的遗传性心脏病之一。其特征包括异常心肌细胞肥大、微血管功能障碍和细胞外基质的积累增加。我们旨在揭示与 HCM 发病机制相关的基因,并为诊断和治疗提供潜在靶点。通过加权基因共表达网络分析(WGCNA)鉴定关键模块。利用预测的 miRNA 和最可能的枢纽基因构建 miRNA-mRNA 网络,进行基因集富集分析(GSEA)。通过接收者操作特征(ROC)曲线验证枢纽基因的诊断能力。使用正常成年心脏的单细胞测序(sc-RNA seq)数据进一步预测表达枢纽基因的特定细胞类型。WGCNA 将基因分配到不同的模块中,发现红色模块中包含的基因与 HCM 疾病的相关性最强。差异表达基因和枢纽基因之间有 2.5%的基因是共同的。通过 miRNA-mRNA 网络,骨钙素(OMD)被鉴定为最有潜力的枢纽基因。GSEA 表明 OMD 主要参与细胞外基质的合成,对免疫系统有一定的抑制作用。验证了 OMD 在 HCM 中的表达,ROC 曲线分析表明 OMD 可以区分 HCM 与对照组,曲线下面积(AUC)>0.7。sc-RNA seq 表明 OMD 主要在心脏成纤维细胞的后期表达,提示 OMD 可能对成纤维细胞有影响,参与 HCM 的发病机制。OMD 可能成为未来 HCM 的生物标志物和治疗靶点。

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