Cai Xiaohui, Huang YanQing, Chen Honglin, Qi Qiancheng, Xu Meijuan, Xu Peng, Wu Xinzhong
Guangxi Key Laboratory of Beibu Gulf Marine Biodiversity Conservation, Beibu Gulf University, Qinzhou, 536011, China.
Zhejiang University, College of Animal Sciences, Hangzhou, 310058, China.
Heliyon. 2021 Feb 26;7(2):e06299. doi: 10.1016/j.heliyon.2021.e06299. eCollection 2021 Feb.
The transcription factor Dp1, as a binding partner, often forms a dimerization complex with typical E2F to play a central role in regulating gene expression during G1/S cell cycle progression. In this study, a full-length cDNA () was successfully cloned and characterized from the large yellow croaker . The nucleotidic sequence of is 1,427 bp long with an open reading frame (ORF) of 1,239 bp encoding a putative protein of 412 amino acids, a 5'-untranslated region of 116 bp and a 3'-untranslated region of 70 bp. Prediction of protein domains showed that PcDp1 contains a DNA-binding domain (DBD) with a DEF box, a dimerization domain and an acidic region at with transcription activity. Homology comparisons indicated that PcDp1 shared the highest sequence identity of 98.55% with dp1, followed by 88.72% identity with dp1 and a relatively low identity of 78.91-80.55% with its mammalian and amphibian counterparts. The mRNA of showed ubiquitously expression in all analyzed tissues, with the highest level of expression in the body kidney. Moderate expression levels of was found in several immune-related tissues including the gills, head kidney and liver, indicating that PcDp1 might play an important role in osmotic pressure regulation and immune response of the large yellow croaker. The subcellular localization of PcDp1 revealed that it is mainly distributed in the cytoplasm both in COS-7 and parenchymal cells of the spleen, head kidney and kidney tissues. Furthermore, the recombinant PcDp1 exhibited DNA-binding activity to E2F site . In conclusion, these results indicated that PcDp1 may participate in immune regulation and provide a foundation for further study of the regulatory mechanism of Dp1 in teleosts.
转录因子Dp1作为一种结合伴侣,常与典型的E2F形成二聚体复合物,在G1/S细胞周期进程中调控基因表达方面发挥核心作用。在本研究中,成功从大黄鱼中克隆并鉴定出一个全长cDNA()。该cDNA的核苷酸序列长1427 bp,开放阅读框(ORF)为1239 bp,编码一个由412个氨基酸组成的推定蛋白,5'非翻译区为116 bp,3'非翻译区为70 bp。蛋白质结构域预测表明,PcDp1含有一个带有DEF框的DNA结合结构域(DBD)、一个二聚化结构域以及一个位于具有转录活性的酸性区域。同源性比较表明,PcDp1与dp1的序列同一性最高,为98.55%,其次与dp1的同一性为88.72%,与其哺乳动物和两栖动物对应物的同一性相对较低,为78.91 - 80.55%。PcDp1的mRNA在所有分析组织中均有广泛表达,在体肾中的表达水平最高。在鳃、头肾和肝脏等几个免疫相关组织中发现了中等水平的PcDp1表达,这表明PcDp1可能在大黄鱼的渗透压调节和免疫反应中发挥重要作用。PcDp1的亚细胞定位显示,它主要分布在COS - 7细胞以及脾脏、头肾和肾组织的实质细胞的细胞质中。此外,重组PcDp1对E2F位点表现出DNA结合活性。总之,这些结果表明PcDp1可能参与免疫调节,并为进一步研究硬骨鱼中Dp1的调控机制提供了基础。