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利用美国环保署 CompTox 化学品仪表板来解释来自人体呼吸和其他生物介质的靶向和非靶向 GC-MS 分析。

Using the US EPA CompTox Chemicals Dashboard to interpret targeted and non-targeted GC-MS analyses from human breath and other biological media.

机构信息

Gillings School of Public Health, University of North Carolina, Chapel Hill, NC, United States of America.

出版信息

J Breath Res. 2021 Mar 18;15(2):025001. doi: 10.1088/1752-7163/abdb03.

DOI:10.1088/1752-7163/abdb03
PMID:33734097
Abstract

The U.S. EPA CompTox Chemicals Dashboard is a freely available web-based application providing access to chemistry, toxicity, and exposure data for ∼900 000 chemicals. Data, search functionality, and prediction models within the Dashboard can help identify chemicals found in environmental analyses and human biomonitoring. It was designed to deliver data generated to support computational toxicology to reduce chemical testing on animals and provide access to new approach methodologies including prediction models. The inclusion of mass and formula-based searches, together with relevant ranking approaches, allows for the identification and prioritization of exogenous (environmental) chemicals from high resolution mass spectrometry in need of further evaluation. The Dashboard includes chemicals that can be detected by liquid chromatography, gas chromatography-mass spectrometry (GC-MS) and direct-MS analyses, and chemical lists have been added that highlight breath-borne volatile and semi-volatile organic compounds. The Dashboard can be searched using various chemical identifiers (e.g. chemical synonyms, CASRN and InChIKeys), chemical formula, MS-ready formulae monoisotopic mass, consumer product categories and assays/genes associated with high-throughput screening data. An integrated search at a chemical level performs searches against PubMed to identify relevant published literature. This article describes specific procedures using the Dashboard as a first-stop tool for exploring both targeted and non-targeted results from GC-MS analyses of chemicals found in breath, exhaled breath condensate, and associated aerosols.

摘要

美国环保署 CompTox 化学品数据仪表板是一个免费的基于网络的应用程序,可获取约 90 万种化学物质的化学、毒性和暴露数据。仪表板中的数据、搜索功能和预测模型有助于识别环境分析和人体生物监测中发现的化学物质。它旨在提供支持计算毒理学的数据,以减少对动物的化学测试,并提供包括预测模型在内的新方法学的途径。包含基于质量和公式的搜索以及相关的排名方法,可用于从高分辨率质谱中识别和优先考虑需要进一步评估的外源性(环境)化学物质。仪表板包括可通过液相色谱、气相色谱-质谱 (GC-MS) 和直接-MS 分析检测到的化学物质,并且添加了突出呼吸挥发性和半挥发性有机化合物的化学物质列表。仪表板可以使用各种化学标识符(例如化学同义词、CASRN 和 InChIKey)、化学公式、MS 准备公式单同位素质量、与高通量筛选数据相关的消费品类别和测定/基因进行搜索。在化学级别进行的集成搜索会针对 PubMed 进行搜索,以识别与呼吸、呼出冷凝物和相关气溶胶中发现的化学物质的 GC-MS 分析的靶向和非靶向结果相关的相关已发表文献。本文介绍了使用仪表板作为探索呼吸、呼出冷凝物和相关气溶胶中发现的化学物质的 GC-MS 分析的靶向和非靶向结果的第一个工具的具体步骤。

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