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本文引用的文献

1
Denoising DNA Encoded Library Screens with Sparse Learning.基于稀疏学习的 DNA 编码文库筛选降噪。
ACS Comb Sci. 2020 Aug 10;22(8):410-421. doi: 10.1021/acscombsci.0c00007. Epub 2020 Jun 26.
2
Machine Learning on DNA-Encoded Libraries: A New Paradigm for Hit Finding.基于 DNA 编码文库的机器学习:发现命中物的新范式。
J Med Chem. 2020 Aug 27;63(16):8857-8866. doi: 10.1021/acs.jmedchem.0c00452. Epub 2020 Jun 11.
3
The Impact of Variable Selection Coverage on Detection of Ligands from a DNA-Encoded Library Screen.可变选择覆盖率对 DNA 编码文库筛选中配体检测的影响。
SLAS Discov. 2020 Jun;25(5):515-522. doi: 10.1177/2472555220908240. Epub 2020 Feb 28.
4
DNA-Encoded Library Technology-Based Discovery, Lead Optimization, and Prodrug Strategy toward Structurally Unique Indoleamine 2,3-Dioxygenase-1 (IDO1) Inhibitors.基于 DNA 编码文库技术的发现、先导化合物优化及结构独特吲哚胺 2,3-双加氧酶-1(IDO1)抑制剂的前药策略。
J Med Chem. 2020 Apr 9;63(7):3552-3562. doi: 10.1021/acs.jmedchem.9b01799. Epub 2020 Mar 19.
5
DNA-Encoded Library Screening as Core Platform Technology in Drug Discovery: Its Synthetic Method Development and Applications in DEL Synthesis.DNA 编码化合物库筛选作为药物发现的核心平台技术:其合成方法的发展及在 DEL 合成中的应用。
J Med Chem. 2020 Jul 9;63(13):6578-6599. doi: 10.1021/acs.jmedchem.9b01782. Epub 2020 Feb 19.
6
Discovery of a Bromodomain and Extraterminal Inhibitor with a Low Predicted Human Dose through Synergistic Use of Encoded Library Technology and Fragment Screening.通过编码文库技术和片段筛选的协同使用发现一种预测人体剂量低的溴结构域和末端抑制剂。
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7
Small-Molecule Modulators of the ATPase VCP/p97 Affect Specific p97 Cellular Functions.小分子 VCP/p97 ATPase 调节剂影响特定的 p97 细胞功能。
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8
Designing DNA Encoded Libraries of Diverse Products in a Focused Property Space.在聚焦性质空间中设计多样化产品的 DNA 编码文库。
J Chem Inf Model. 2019 Nov 25;59(11):4645-4653. doi: 10.1021/acs.jcim.9b00729. Epub 2019 Nov 14.
9
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DNA编码文库筛选后从活性分子到先导化合物优化的趋势

Trends in Hit-to-Lead Optimization Following DNA-Encoded Library Screens.

作者信息

Reiher Christopher A, Schuman David P, Simmons Nicholas, Wolkenberg Scott E

机构信息

Discovery Chemistry, Janssen Research & Development, LLC, Welsh & McKean Roads, Spring House, Pennsylvania 19477, United States.

Discovery Chemistry, Janssen Research & Development, LLC, 3210 Merryfield Row, San Diego, California 92121, United States.

出版信息

ACS Med Chem Lett. 2021 Feb 11;12(3):343-350. doi: 10.1021/acsmedchemlett.0c00615. eCollection 2021 Mar 11.

DOI:10.1021/acsmedchemlett.0c00615
PMID:33738060
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7957921/
Abstract

DNA-encoded library (DEL) screens have emerged as a powerful hit-finding tool for a number of biological targets. In this Innovations article, we review published hit-to-lead optimization studies following DEL screens. Trends in molecular property changes from hit to lead are identified, and specific optimization tactics are exemplified in case studies. Across the studies, physicochemical property and structural changes post-DEL screening are similar to those which occur during hit-to-lead optimization following high throughputscreens (HTS). However, unique aspects of DEL-the combinatorial synthetic methods which enable DEL synthesis and the linker effects at the DNA attachment point-impact the strategies and outcomes of hit-to-lead optimizations.

摘要

DNA编码文库(DEL)筛选已成为一种针对多种生物学靶点的强大的命中发现工具。在这篇创新文章中,我们回顾了DEL筛选后已发表的从命中物到先导物的优化研究。确定了从命中物到先导物分子性质变化的趋势,并在案例研究中举例说明了具体的优化策略。在各项研究中,DEL筛选后的物理化学性质和结构变化与高通量筛选(HTS)后从命中物到先导物优化过程中发生的变化相似。然而,DEL的独特之处——实现DEL合成的组合合成方法以及DNA连接点处的连接子效应——影响了从命中物到先导物优化的策略和结果。