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射血分数保留的心力衰竭中m6A RNA甲基化的改变

Alteration of m6A RNA Methylation in Heart Failure With Preserved Ejection Fraction.

作者信息

Zhang Beijian, Xu Yamei, Cui Xiaotong, Jiang Hao, Luo Wei, Weng Xinyu, Wang Yun, Zhao Yuhong, Sun Aijun, Ge Junbo

机构信息

Department of Cardiology, Zhongshan Hospital, Fudan University, Shanghai Institute of Cardiovascular Diseases, Shanghai, China.

Key Laboratory of Viral Heart Diseases, National Health Commission, Shanghai, China.

出版信息

Front Cardiovasc Med. 2021 Mar 5;8:647806. doi: 10.3389/fcvm.2021.647806. eCollection 2021.

Abstract

Heart failure with preserved ejection fraction (HFpEF) is a heterogeneous disease, in which its pathogenesis is very complex and far from defined. Here, we explored the N-methyladenosine (m6A) RNA methylation alteration in patients with HFpEF and mouse model of HFpEF. In this case-control study, peripheral blood mononuclear cells (PBMCs) were separated from peripheral blood samples obtained from 16 HFpEF patients and 24 healthy controls. The change of m6A regulators was detected by quantitative real-time PCR (RT-PCR). A "two-hit" mouse model of HFpEF was induced by a high-fat diet and drinking water with 0.5 g/L of -nitro-l-arginine methyl ester (L-NAME). MeRIP-seq was used to map transcriptome-wide m6A in control mice and HFpEF mice, and the gene expression was high-throughput detected by RNA-seq. The expression of m6A writers , and ; m6A eraser ; and reader was up-regulated in HFpEF patients, compared with health controls. Furthermore, the expression of was also elevated in HFpEF mice. A total of 661 m6A peaks were significantly changed by MeRIP-seq. Gene Ontology (GO) analysis revealed that protein folding, ubiquitin-dependent ERAD pathway, and positive regulation of RNA polymerase II were the three most significantly altered biological processes in HFpEF. The pathways including proteasome, protein processing in the endoplasmic reticulum, and PI3K-Akt signaling pathway were significantly changed in HFpEF by Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. The expression pattern of m6A regulators and m6A landscape is changed in HFpEF. This uncovers a new transcription-independent mechanism of translation regulation. Therefore, our data suggest that the modulation of epitranscriptomic processes, such as m6A methylation, might be an interesting target for therapeutic interventions.

摘要

射血分数保留的心力衰竭(HFpEF)是一种异质性疾病,其发病机制非常复杂且远未明确。在此,我们探究了HFpEF患者和HFpEF小鼠模型中N-甲基腺苷(m6A)RNA甲基化的改变。在这项病例对照研究中,从16例HFpEF患者和24例健康对照者的外周血样本中分离出外周血单个核细胞(PBMC)。通过定量实时PCR(RT-PCR)检测m6A调节因子的变化。采用高脂饮食和含0.5 g/L的L-硝基-L-精氨酸甲酯(L-NAME)的饮用水诱导建立HFpEF“双打击”小鼠模型。运用MeRIP-seq技术对对照小鼠和HFpEF小鼠进行全转录组范围的m6A图谱绘制,并通过RNA-seq高通量检测基因表达。与健康对照相比,HFpEF患者中m6A甲基转移酶、和;m6A去甲基化酶;以及m6A阅读蛋白的表达上调。此外,在HFpEF小鼠中也升高。MeRIP-seq共检测到661个m6A峰发生显著变化。基因本体论(GO)分析显示,蛋白质折叠、泛素依赖性内质网相关降解途径以及RNA聚合酶II的正调控是HFpEF中三个改变最显著的生物学过程。通过京都基因与基因组百科全书(KEGG)通路分析发现,包括蛋白酶体、内质网中的蛋白质加工以及PI3K-Akt信号通路在内的通路在HFpEF中发生了显著变化。HFpEF中m6A调节因子的表达模式和m6A图谱发生了改变。这揭示了一种新的不依赖转录的翻译调控机制。因此,我们的数据表明,对外转录组过程(如m6A甲基化)的调控可能是一个有吸引力的治疗干预靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8b1d/7973040/695bef113bf5/fcvm-08-647806-g0001.jpg

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