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致癌性 MLLT1 突变体的结构与抑制剂结合特性。

Structure and Inhibitor Binding Characterization of Oncogenic MLLT1 Mutants.

机构信息

Structural Genomics Consortium and Buchmann Institute for Molecular Life Sciences, Goethe University Frankfurt, Max-von-Laue-Straße 15, 60438 Frankfurt am Main, Germany.

Institute of Pharmaceutical Chemistry, Goethe University Frankfurt, Max-von-Laue-Straße 9, 60438 Frankfurt am Main, Germany.

出版信息

ACS Chem Biol. 2021 Apr 16;16(4):571-578. doi: 10.1021/acschembio.0c00960. Epub 2021 Mar 21.

DOI:10.1021/acschembio.0c00960
PMID:33749253
Abstract

Dysfunction of YEATS-domain-containing MLLT1, an acetyl/acyl-lysine dependent epigenetic reader domain, has been implicated in the development of aggressive cancers. Mutations in the YEATS domain have been recently reported as a cause of MLLT1 aberrant reader function. However, the structural basis for the reported alterations in affinity for acetylated/acylated histone has remained elusive. Here, we report the crystal structures of both insertion and substitution mutants present in cancer, revealing significant conformational changes of the YEATS-domain loop 8. Structural comparison demonstrates that not only did such alteration alter the binding interface for acetylated/acylated histones, but the sequence alterations in the loop in T1 mutant may enable dimeric assembly consistent with inducing self-association behavior. Nevertheless, we show that also the MLLT1 mutants can be targeted by developed acetyllysine mimetic inhibitors with affinities similarly to wild-type. Our report provides a structural basis for the altered behaviors and a potential strategy for targeting oncogenic MLLT1 mutants.

摘要

YEATS 结构域包含的 MLLT1 功能障碍,一种乙酰化/酰化赖氨酸依赖的表观遗传读取域,与侵袭性癌症的发生有关。最近报道 YEATS 结构域的突变是导致 MLLT1 异常读取功能的原因。然而,报道的亲和力改变的乙酰化/酰化组蛋白的结构基础仍然难以捉摸。在这里,我们报告了存在于癌症中的插入和取代突变体的晶体结构,揭示了 YEATS 结构域环 8 的显著构象变化。结构比较表明,这种改变不仅改变了与乙酰化/酰化组蛋白的结合界面,而且 T1 突变体中环中的序列改变可能允许二聚体组装,这与诱导自缔合行为一致。然而,我们还表明,开发的乙酰赖氨酸模拟抑制剂也可以靶向 MLLT1 突变体,其亲和力与野生型相似。我们的报告为改变的行为提供了结构基础,并为靶向致癌 MLLT1 突变体提供了一种潜在的策略。

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引用本文的文献

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A potent and selective ENL degrader suppresses oncogenic gene expression and leukemia progression.一种强效且选择性的 ENL 降解剂可抑制致癌基因表达和白血病进展。
Sci Adv. 2024 Aug 30;10(35):eado1432. doi: 10.1126/sciadv.ado1432. Epub 2024 Aug 28.
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Small-molecule tools for YEATS domain proteins.用于 YEATS 结构域蛋白的小分子工具。
Curr Opin Chem Biol. 2023 Dec;77:102404. doi: 10.1016/j.cbpa.2023.102404. Epub 2023 Nov 3.
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Conformational and Thermodynamic Differences Underlying Wild-Type and Mutant Eleven-Nineteen-Leukemia YEATS Domain Specificity for Epigenetic Marks.野生型和突变体 Eleven-Nineteen-白血病 YEATS 结构域对表观遗传标记特异性的构象和热力学差异。
J Chem Inf Model. 2023 Feb 27;63(4):1229-1238. doi: 10.1021/acs.jcim.2c01660. Epub 2023 Feb 14.
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Hotspot mutations in the structured ENL YEATS domain link aberrant transcriptional condensates and cancer.结构 ENL YEATS 结构域中的热点突变与异常转录凝聚物和癌症相关。
Mol Cell. 2022 Nov 3;82(21):4080-4098.e12. doi: 10.1016/j.molcel.2022.09.034. Epub 2022 Oct 21.