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引起甘薯根腐病的高质量基因组资源。

High-Quality Genome Resource of Causing Foot Rot Disease of Sweet Potato.

机构信息

Crop Research Institute, Guangdong Academy of Agricultural Sciences, Guangdong Provincial Key Laboratory of Crops Genetics and Improvement, Guangzhou, Guangdong, China.

Taizhou Vocational College of Science & Technology, Taizhou, Zhejiang, China.

出版信息

Plant Dis. 2021 Oct;105(10):3279-3281. doi: 10.1094/PDIS-07-20-1473-A. Epub 2021 Oct 26.

DOI:10.1094/PDIS-07-20-1473-A
PMID:33754866
Abstract

Foot rot of sweet potato caused by severely affects yield and quality worldwide. Research on this pathogen is limited due to nonavailability of genome resources. Here, we report a high-quality genome sequence of isolate CRI 305-2, which was originally isolated from infected stem of sweet potato in Taizhou City, Zhejiang Province, China. The genome comprised a total length of 56,108,228 bp, consisted of 47 scaffolds with an overall G+C content of 48.7% and an N50 of 2,479,481 bp. This resource can be used as a reference for evolution mechanisms and comparative genomic research.

摘要

甘薯根腐病由 引起,严重影响全球的产量和质量。由于缺乏基因组资源,对该病原体的研究受到限制。在这里,我们报告了中国浙江台州地区感染甘薯茎的 分离株 CRI 305-2 的高质量基因组序列。该基因组全长 56,108,228 bp,由 47 个支架组成,总 GC 含量为 48.7%,N50 为 2,479,481 bp。该资源可作为进化机制和比较基因组研究的参考。

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