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基于高度并行微流控技术的单细胞骨架马达力谱分析

Highly-Parallel Microfluidics-Based Force Spectroscopy on Single Cytoskeletal Motors.

机构信息

B CUBE - Center for Molecular Bioengineering, Technische Universität Dresden, 01069, Dresden, Germany.

Zernike Institute for Advanced Materials, University of Groningen, Groningen, AE, 9700, Netherlands.

出版信息

Small. 2021 May;17(18):e2007388. doi: 10.1002/smll.202007388. Epub 2021 Mar 23.

DOI:10.1002/smll.202007388
PMID:33759372
Abstract

Cytoskeletal motors transform chemical energy into mechanical work to drive essential cellular functions. Optical trapping experiments have provided crucial insights into the operation of these molecular machines under load. However, the throughput of such force spectroscopy experiments is typically limited to one measurement at a time. Here, a highly-parallel, microfluidics-based method that allows for rapid collection of force-dependent motility parameters of cytoskeletal motors with two orders of magnitude improvement in throughput compared to currently available methods is introduced. Tunable hydrodynamic forces to stepping kinesin-1 motors via DNA-tethered beads and utilize a large field of view to simultaneously track the velocities, run lengths, and interaction times of hundreds of individual kinesin-1 molecules under varying resisting and assisting loads are applied. Importantly, the 16 µm long DNA tethers between the motors and the beads significantly reduces the vertical component of the applied force pulling the motors away from the microtubule. The approach is readily applicable to other molecular systems and constitutes a new methodology for parallelized single-molecule force studies on cytoskeletal motors.

摘要

细胞骨架马达将化学能转化为机械功,驱动基本的细胞功能。光学捕获实验为这些分子马达在负载下的工作提供了至关重要的见解。然而,这种力谱实验的通量通常一次只能进行一次测量。在这里,引入了一种基于微流控的高通量方法,可以快速收集细胞骨架马达的力依赖性运动参数,与目前可用的方法相比,通量提高了两个数量级。通过 DNA 连接珠施加可调谐的流体动力来驱动步进驱动蛋白-1 马达,并利用大视场同时跟踪数百个单个驱动蛋白-1 分子在不同的阻力和辅助负载下的速度、运行长度和相互作用时间。重要的是,马达和珠子之间的 16 µm 长 DNA 系绳显著降低了将马达从微管拉开的施加力的垂直分量。该方法易于应用于其他分子系统,是对细胞骨架马达进行并行化单分子力研究的新方法。

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1
Highly-Parallel Microfluidics-Based Force Spectroscopy on Single Cytoskeletal Motors.基于高度并行微流控技术的单细胞骨架马达力谱分析
Small. 2021 May;17(18):e2007388. doi: 10.1002/smll.202007388. Epub 2021 Mar 23.
2
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Force-dependent detachment of kinesin-2 biases track switching at cytoskeletal filament intersections.力依赖性的驱动蛋白-2的脱离会使在细胞骨架丝交叉处的轨迹转换产生偏差。
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Differential effect of multiple kinesin motors on run length, force and microtubule binding rate.多种肌球蛋白马达对奔跑长度、力和微管结合速率的差异影响。
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The Kinesin-8 Kip3 Depolymerizes Microtubules with a Collective Force-Dependent Mechanism.驱动蛋白-8 Kip3通过一种集体力依赖机制使微管解聚。
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Directional loading of the kinesin motor molecule as it buckles a microtubule.驱动蛋白运动分子在使微管弯曲时的定向负载。
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引用本文的文献

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Enhanced Processivity and Collective Force Production of Kinesins at Low Radial Forces.在低径向力下驱动蛋白的增强的持续合成能力和集体力产生
bioRxiv. 2025 Aug 31:2025.08.27.672644. doi: 10.1101/2025.08.27.672644.
2
DNA tensiometer reveals catch-bond detachment kinetics of kinesin-1, -2 and -3.DNA张力计揭示驱动蛋白-1、-2和-3的捕获键解离动力学。
bioRxiv. 2025 Mar 25:2024.12.03.626575. doi: 10.1101/2024.12.03.626575.
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Resolving Molecular Heterogeneity with Single-Molecule Centrifugation.利用单分子离心技术解析分子异质性。
J Am Chem Soc. 2023 Feb 15;145(6):3276-3282. doi: 10.1021/jacs.2c11450. Epub 2023 Jan 30.
4
High-throughput force measurement of individual kinesin-1 motors during multi-motor transport.高通量测量个体肌球蛋白-1 分子马达在多分子运输过程中的力。
Nanoscale. 2022 Sep 2;14(34):12463-12475. doi: 10.1039/d2nr01701f.
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The force required to remove tubulin from the microtubule lattice by pulling on its α-tubulin C-terminal tail.通过拉动微管蛋白α-末端尾巴从微管晶格中去除微管蛋白所需的力。
Nat Commun. 2022 Jun 25;13(1):3651. doi: 10.1038/s41467-022-31069-x.
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Multiplex flow magnetic tweezers reveal rare enzymatic events with single molecule precision.多重流式磁镊以单分子精度揭示罕见的酶学事件。
Nat Commun. 2020 Sep 18;11(1):4714. doi: 10.1038/s41467-020-18456-y.