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染色体视角下的白千层,一个处于基因组稳定过程中的热带多倍体复合体。

Chromosomal view of Lippia alba, a tropical polyploid complex under genome stabilization process.

机构信息

Department of Biology, Federal University of Juiz de Fora, Juiz de Fora, MG, 36036-900, Brazil.

Royal Botanic Gardens, Kew, Richmond, TW9 3AE, UK.

出版信息

Protoplasma. 2022 Jan;259(1):33-46. doi: 10.1007/s00709-021-01636-y. Epub 2021 Mar 24.

Abstract

Lippia alba is a phenotypically variable tropical shrub thought to comprise a young autopolyploid complex. Chromosome numbers in L. alba include 2n = 30, 38, 45, 60, and 90. High levels of chemical and phenotypic variation associated with economic and medicinal importance were reported. However, the genetic background including chromosome composition remains under-explored. Furthermore, the occurrence of at least four ploidal levels in L. alba and the lack of data for polyploid plants in tropical areas also merit further study of L. alba. Here we assessed the chromosome composition using two new satellite repeats (CL98 and CL66) applied as FISH probes to mitotic chromosomes, and we proposed to calculate the degree of homozygosis for CL66 satDNA (named as index h) and to associate it to meiotic instability. The CL98 mapping showed few variations in both number of signals and position. However, the levels of structural homozygosity for a satellite repeat CL66 were very variable. The numbers of CL66-bearing-chromosomes were under-represented in tetraploids relative to diploids implying that CL66 arrays have been lost in tetraploid lineages as a result of increased meiotic instability. High percentage of irregularities was observed in meiotic cells, especially in polyploids. L. alba complex comprised a mixture of homomorphic and heteromorphic chromosomes. Overall, the polyploid complex presents features typical of both young and older stable polyploids. It seems that L. alba genome is still in the process of stabilization.

摘要

香根草是一种表型多变的热带灌木,被认为是一个年轻的自倍体复合体。香根草的染色体数目包括 2n = 30、38、45、60 和 90。报道了与经济和药用重要性相关的高水平的化学和表型变异。然而,包括染色体组成在内的遗传背景仍未得到充分探索。此外,香根草中至少存在四个倍性水平,并且热带地区多倍体植物的数据缺乏,这也使得对香根草的进一步研究变得有必要。在这里,我们使用两种新的卫星重复(CL98 和 CL66)作为 FISH 探针应用于有丝分裂染色体,评估了染色体的组成,并提出了计算 CL66 satDNA (命名为指数 h)的同型程度,并将其与减数分裂不稳定性相关联。CL98 的定位在信号数量和位置上都很少有变化。然而,卫星重复 CL66 的结构同型程度非常多变。四倍体中 CL66 带染色体的数量相对于二倍体来说是不足的,这表明 CL66 阵列由于减数分裂不稳定性的增加而在四倍体谱系中丢失了。在减数分裂细胞中观察到很高比例的不规则性,尤其是在多倍体中。香根草复合体由同形和异形染色体混合组成。总的来说,多倍体复合体具有年轻和稳定的多倍体的典型特征。香根草基因组似乎仍在稳定化的过程中。

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