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来自中国青海湖的科斯塔1836(直翅目:蝗科)的完整线粒体基因组及其系统发育。

The complete mitochondrial genome of Costa 1836 (Orthoptera: Acrididae) from Qinghai Lake, China and its phylogeny.

作者信息

Wang Jun, Tang Lei

机构信息

State Key Laboratory of Hydrology-Water Resources and Hydraulic Engineering, Nanjing Hydraulic Research Institute, Nanjing, China.

Center for Eco-Environmental Research, Nanjing Hydraulic Research Institute, Nanjing, China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 11;6(3):732-733. doi: 10.1080/23802359.2020.1860701.

Abstract

The complete mitochondrial genome of (Orthoptera: Acrididae: Calliptaminae) from Qinghai Lake, Qinghai province, China is a circular molecule of 15,668 bp in size, and contains 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and one AT-rich region. The overall nucleotide composition is 41.8% of A, 30.9% of T, 11.3% of G, and 16.0% of C. All PCGs started with typical ATN codon, e.g. one with ATA, two with ATT and ATC, and eight with ATG. Eleven PCGs ended with complete stop codon TAA, and the other two genes (ND1 and ND4L) ended with TAG. Phylogenetic trees were reconstructed with 13 PCGs using Bayesian Inference (BI) and maximum likelihood (ML) to validate the taxonomic status of , exhibiting the close relationships with .

摘要

来自中国青海省青海湖的[某种蝗虫名称](直翅目:蝗科:Calliptaminae亚科)的完整线粒体基因组是一个大小为15,668 bp的环状分子,包含13个蛋白质编码基因、22个转运RNA基因、2个核糖体RNA基因和一个富含AT的区域。总体核苷酸组成是:A占41.8%,T占30.9%,G占11.3%,C占16.0%。所有蛋白质编码基因均以典型的ATN密码子起始,例如,一个以ATA起始,两个以ATT和ATC起始,八个以ATG起始。11个蛋白质编码基因以完整的终止密码子TAA结束,另外两个基因(ND1和ND4L)以TAG结束。使用贝叶斯推断(BI)和最大似然法(ML),基于13个蛋白质编码基因重建了系统发育树,以验证[某种蝗虫名称]的分类地位,结果显示其与[相关物种名称]关系密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f358/7954494/9755f8eaae43/TMDN_A_1860701_F0001_C.jpg

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