Department of Biofunctional Chemistry, Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan.
Department of Macromolecular Science, Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan.
Protein Sci. 2021 May;30(5):1044-1055. doi: 10.1002/pro.4070. Epub 2021 Apr 3.
The alternation of substrate specificity expands the application range of enzymes in industrial, medical, and pharmaceutical fields. l-Glutamate oxidase (LGOX) from Streptomyces sp. X-119-6 catalyzes the oxidative deamination of l-glutamate to produce 2-ketoglutarate with ammonia and hydrogen peroxide. LGOX shows strict substrate specificity for l-glutamate. Previous studies on LGOX revealed that Arg305 in its active site recognizes the side chain of l-glutamate, and replacement of Arg305 by other amino acids drastically changes the substrate specificity of LGOX. Here we demonstrate that the R305E mutant variant of LGOX exhibits strict specificity for l-arginine. The oxidative deamination activity of LGOX to l-arginine is higher than that of l-arginine oxidase form from Pseudomonas sp. TPU 7192. X-ray crystal structure analysis revealed that the guanidino group of l-arginine is recognized not only by Glu305 but also Asp433, Trp564, and Glu617, which interact with Arg305 in wild-type LGOX. Multiple interactions by these residues provide strict specificity and high activity of LGOX R305E toward l-arginine. LGOX R305E is a thermostable and pH stable enzyme. The amount of hydrogen peroxide, which is a byproduct of oxidative deamination of l-arginine by LGOX R305E, is proportional to the concentration of l-arginine in a range from 0 to 100 μM. The linear relationship is maintained around 1 μM of l-arginine. Thus, LGOX R305E is suitable for the determination of l-arginine.
酶的底物特异性的改变扩展了其在工业、医学和制药领域的应用范围。来自链霉菌 sp. X-119-6 的 l-谷氨酸氧化酶 (LGOX) 催化 l-谷氨酸的氧化脱氨反应,生成氨和过氧化氢的 2-酮戊二酸。LGOX 对 l-谷氨酸表现出严格的底物特异性。对 LGOX 的先前研究表明,其活性部位的 Arg305 识别 l-谷氨酸的侧链,而 Arg305 被其他氨基酸取代会极大地改变 LGOX 的底物特异性。在这里,我们证明 LGOX 的 R305E 突变变体对 l-精氨酸表现出严格的特异性。LGOX 对 l-精氨酸的氧化脱氨活性高于来自假单胞菌 sp. TPU 7192 的 l-精氨酸氧化酶形式。X 射线晶体结构分析表明,l-精氨酸的胍基不仅被 Glu305 识别,还被 Asp433、Trp564 和 Glu617 识别,这些残基与野生型 LGOX 中的 Arg305 相互作用。这些残基的多重相互作用为 LGOX R305E 对 l-精氨酸提供了严格的特异性和高活性。LGOX R305E 是一种热稳定且 pH 稳定的酶。LGOX R305E 氧化脱氨 l-精氨酸的副产物过氧化氢的量与 0 至 100 μM 范围内的 l-精氨酸浓度成正比。在约 1 μM 的 l-精氨酸周围保持线性关系。因此,LGOX R305E 适用于 l-精氨酸的测定。