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利用 INLA-SPDE 方法对刚果民主共和国埃博拉疫情进行贝叶斯空间建模。

Bayesian spatial modelling of Ebola outbreaks in Democratic Republic of Congo through the INLA-SPDE approach.

机构信息

Public Health & Tropical Medicine, College of Public Health, Medical and Veterinary Sciences, James Cook University, QLD, Australia.

Australian Institute of Tropical Health and Medicine, James Cook University, QLD, Australia.

出版信息

Zoonoses Public Health. 2021 Aug;68(5):443-451. doi: 10.1111/zph.12828. Epub 2021 Mar 29.

DOI:10.1111/zph.12828
PMID:33780159
Abstract

Ebola virus (EBV) disease is a globally acknowledged public health emergency, endemic in the west and equatorial Africa. To understand the epidemiology especially the dynamic pattern of EBV disease, we analyse the EBV case notification data for confirmed cases and reported deaths of the ongoing outbreak in the Democratic Republic of Congo (DRC) between 2018 and 2019, and examined the impact of reported violence on the spread of the virus. Using fully Bayesian geo-statistical analysis through stochastic partial differential equations (SPDE) allows us to quantify the spatial patterns at every point of the spatial domain. Parameter estimation was based on the integrated nested Laplace approximation (INLA). Our findings revealed a positive association between violent events in the affected areas and the reported EBV cases (posterior mean = 0.024, 95% CI: 0.005, 0.045) and deaths (posterior mean = 0.022, 95% CI: 0.005, 0.041). Translating to an increase of 2.4% and 2.2% in the relative risks of EBV cases and deaths associated with a unit increase in violent events (one additional Ebola case is associated with an average of 45 violent events). We also observed clusters of EBV cases and deaths spread to neighbouring locations in similar manners. Findings from the study are therefore useful for hot spot identification, location-specific disease surveillance and intervention.

摘要

埃博拉病毒(EBV)病是一种全球公认的公共卫生紧急事件,在西部和赤道非洲流行。为了了解埃博拉病毒病的流行病学,特别是其动态模式,我们分析了 2018 年至 2019 年期间刚果民主共和国(DRC)正在发生的埃博拉病毒病疫情的确诊病例和报告死亡的病例通知数据,并研究了报告的暴力事件对病毒传播的影响。通过随机偏微分方程(SPDE)的完全贝叶斯地质统计分析,我们可以量化空间域中每个点的空间模式。参数估计基于集成嵌套拉普拉斯逼近(INLA)。我们的研究结果表明,受影响地区的暴力事件与报告的 EBV 病例(后验均值=0.024,95%置信区间:0.005,0.045)和死亡(后验均值=0.022,95%置信区间:0.005,0.041)之间存在正相关关系。这相当于与暴力事件增加一个单位相关的 EBV 病例和死亡的相对风险分别增加 2.4%和 2.2%(每增加一个埃博拉病例,平均会有 45 起暴力事件)。我们还观察到 EBV 病例和死亡的集群以类似的方式传播到附近的地点。因此,该研究的结果有助于识别热点、特定地点的疾病监测和干预。

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