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墨西哥葡萄园中的多样性。

Genetic Diversity of in Mexican Vineyards.

机构信息

Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av. IPN 2508 San Pedro Zacatenco, 07360 CDMX, México.

Centro Nacional de Referencia Fitosanitaria, Servicio Nacional de Servicio Nacional de Sanidad, Inocuidad y Calidad Agroalimentaria, Secretaría de Agricultura y Desarrollo Rural, 55740 Tecámac, Estado de México.

出版信息

Plant Dis. 2021 May;105(5):1490-1494. doi: 10.1094/PDIS-09-20-1900-RE. Epub 2021 Mar 29.

Abstract

is a xylem-inhabiting phytopathogenic bacterium that affects diverse agriculturally relevant crops. In Mexico, has been reported in the states of Baja California, Coahuila, and Querétaro. In order to determine the genetic diversity of this bacterium in Mexico, 408 grapevine samples were collected from the main producing states in México. For identification, real-time PCR and three-loci end-point PCR were employed. The genotyping of the subspecies was carried out using multilocus sequence typing and analysis, based on seven housekeeping genes: , and The resulting sequences were compared with those present in extant databases. The presence of subsp. in the states of Baja California (sequence type 1), Coahuila (sequence type 1), and Querétaro was confirmed. The isolates from northern Mexico bear high similarity to grapevine isolates from the United States. However, the isolates from Querétaro showed significant differences with currently known sequences, showing that there is genetic variability among the subsp. populations from grapevines in northern and central Mexico.

摘要

是一种木质部栖居的植物病原细菌,影响多种农业相关作物。在墨西哥,已在 Baja California、Coahuila 和 Querétaro 州报告过。为了确定该细菌在墨西哥的遗传多样性,从墨西哥主要生产州采集了 408 个葡萄样本。为了进行鉴定,使用实时 PCR 和三基因座终点 PCR 进行。亚种的基因分型使用基于 7 个看家基因的多位点序列分型和分析进行: 、 和 。所得序列与现有数据库中的序列进行比较。在 Baja California 州(序列型 1)、Coahuila 州(序列型 1)和 Querétaro 州确认存在 亚种 。来自墨西哥北部的分离株与美国的葡萄分离株高度相似。然而,来自 Querétaro 的分离株与目前已知的序列存在显著差异,表明来自墨西哥北部和中部葡萄的 亚种 种群存在遗传变异。

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