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用于癌症合成致死性和联合疗法的CRISPR筛选

CRISPR Screens in Synthetic Lethality and Combinatorial Therapies for Cancer.

作者信息

Castells-Roca Laia, Tejero Eudald, Rodríguez-Santiago Benjamín, Surrallés Jordi

机构信息

Genome Instability and DNA Repair Syndromes Group, Sant Pau Biomedical Research Institute (IIB Sant Pau) and Join Unit UAB-IR Sant Pau on Genomic Medicine, 08041 Barcelona, Spain.

Genetics Department, Hospital de la Santa Creu i Sant Pau, 08041 Barcelona, Spain.

出版信息

Cancers (Basel). 2021 Mar 30;13(7):1591. doi: 10.3390/cancers13071591.


DOI:10.3390/cancers13071591
PMID:33808217
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8037779/
Abstract

Cancer is a complex disease resulting from the accumulation of genetic dysfunctions. Tumor heterogeneity causes the molecular variety that divergently controls responses to chemotherapy, leading to the recurrent problem of cancer reappearance. For many decades, efforts have focused on identifying essential tumoral genes and cancer driver mutations. More recently, prompted by the clinical success of the synthetic lethality (SL)-based therapy of the PARP inhibitors in homologous recombinant deficient tumors, scientists have centered their novel research on SL interactions (SLI). The state of the art to find new genetic interactions are currently large-scale forward genetic CRISPR screens. CRISPR technology has rapidly evolved to be a common tool in the vast majority of laboratories, as tools to implement CRISPR screen protocols are available to all researchers. Taking advantage of SLI, combinatorial therapies have become the ultimate model to treat cancer with lower toxicity, and therefore better efficiency. This review explores the CRISPR screen methodology, integrates the up-to-date published findings on CRISPR screens in the cancer field and proposes future directions to uncover cancer regulation and individual responses to chemotherapy.

摘要

癌症是一种由基因功能障碍积累导致的复杂疾病。肿瘤异质性导致分子多样性,从而对化疗反应产生不同控制,引发癌症复发这一反复出现的问题。几十年来,研究工作一直聚焦于识别关键肿瘤基因和癌症驱动突变。最近,受基于合成致死(SL)的聚乙二醇化酶抑制剂疗法在同源重组缺陷肿瘤中取得临床成功的启发,科学家们将新研究集中在SL相互作用(SLI)上。目前,寻找新基因相互作用的最新技术是大规模正向遗传CRISPR筛选。CRISPR技术已迅速发展成为绝大多数实验室的常用工具,因为所有研究人员都可获得实施CRISPR筛选方案的工具。利用SLI,联合疗法已成为以更低毒性、从而更高效率治疗癌症的终极模式。本综述探讨了CRISPR筛选方法,整合了癌症领域CRISPR筛选的最新已发表研究结果,并提出了揭示癌症调控和个体化疗反应的未来方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b693/8037779/26da7af01b69/cancers-13-01591-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b693/8037779/c49050d221f7/cancers-13-01591-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b693/8037779/26da7af01b69/cancers-13-01591-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b693/8037779/c49050d221f7/cancers-13-01591-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b693/8037779/26da7af01b69/cancers-13-01591-g002.jpg

相似文献

[1]
CRISPR Screens in Synthetic Lethality and Combinatorial Therapies for Cancer.

Cancers (Basel). 2021-3-30

[2]
A CRISPR Platform for Targeted In Vivo Screens.

Methods Mol Biol. 2023

[3]
Parallel CRISPR-Cas9 screens clarify impacts of p53 on screen performance.

Elife. 2020-5-22

[4]
Exploring the genetic space of the DNA damage response for cancer therapy through CRISPR-based screens.

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[5]
Identifying chemogenetic interactions from CRISPR screens with drugZ.

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[6]
Comprehensive prediction of robust synthetic lethality between paralog pairs in cancer cell lines.

Cell Syst. 2021-12-15

[7]
Advancements in CRISPR screens for the development of cancer immunotherapy strategies.

Mol Ther Oncolytics. 2023-10-5

[8]
Synthetic Lethality Signatures Uncovered by Genotype-Specific CRISPR-Cas9 Screens.

CRISPR J. 2019-8

[9]
Towards a CRISPeR understanding of homologous recombination with high-throughput functional genomics.

Curr Opin Genet Dev. 2021-12

[10]
Potential promising of synthetic lethality in cancer research and treatment.

Naunyn Schmiedebergs Arch Pharmacol. 2025-2

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[3]
Predicting host-based, synthetic lethal antiviral targets from omics data.

NAR Mol Med. 2024-1-23

[4]
CRISPR-Based Therapies: Revolutionizing Drug Development and Precision Medicine.

Curr Gene Ther. 2024

[5]
CRISPR-Cas System Is an Effective Tool for Identifying Drug Combinations That Provide Synergistic Therapeutic Potential in Cancers.

Cells. 2023-11-9

[6]
Predicting host-based, synthetic lethal antiviral targets from omics data.

bioRxiv. 2023-8-16

[7]
Theory for High-Throughput Genetic Interaction Screening.

ACS Synth Biol. 2023-8-18

[8]
Genome-wide CRISPR Screen Reveals RAB10 as a Synthetic Lethal Gene in Colorectal and Pancreatic Cancers Carrying SMAD4 Loss.

Cancer Res Commun. 2023-5

[9]
Genetic screens reveal new targetable vulnerabilities in BAP1-deficient mesothelioma.

Cell Rep Med. 2023-2-21

[10]
Synthetic lethal gene pairs: Experimental approaches and predictive models.

Front Genet. 2022-12-1

本文引用的文献

[1]
Keap1 mutation renders lung adenocarcinomas dependent on Slc33a1.

Nat Cancer. 2020-6

[2]
Transcriptional dysregulation by aberrant enhancer activation and rewiring in cancer.

Cancer Sci. 2021-6

[3]
Deep exploration of PARP inhibitors in breast cancer: monotherapy and combination therapy.

J Int Med Res. 2021-2

[4]
SequencErr: measuring and suppressing sequencer errors in next-generation sequencing data.

Genome Biol. 2021-1-25

[5]
Genome-wide CRISPR screens reveal multitiered mechanisms through which mTORC1 senses mitochondrial dysfunction.

Proc Natl Acad Sci U S A. 2021-1-26

[6]
Smoothened-activating lipids drive resistance to CDK4/6 inhibition in Hedgehog-associated medulloblastoma cells and preclinical models.

J Clin Invest. 2021-3-15

[7]
CRISPR/Cas9 screening identifies a kinetochore-microtubule dependent mechanism for Aurora-A inhibitor resistance in breast cancer.

Cancer Commun (Lond). 2021-2

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Defective ALC1 nucleosome remodeling confers PARPi sensitization and synthetic lethality with HRD.

Mol Cell. 2021-2-18

[9]
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Cell Rep. 2020-12-15

[10]
Critical cancer vulnerabilities identified by unbiased CRISPR/Cas9 screens inform on efficient cancer Immunotherapy.

Eur J Immunol. 2020-12

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