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低级别胶质瘤中载脂蛋白B mRNA编辑酶催化多肽样3B(APOBEC3B)表达与临床特征的相关性

Correlation Between APOBEC3B Expression and Clinical Characterization in Lower-Grade Gliomas.

作者信息

Zhang Hao, Chen Zhiyang, Wang Zeyu, Dai Ziyu, Hu Zhengang, Zhang Xun, Hu Min, Liu Zhixiong, Cheng Quan

机构信息

Department of Neurosurgery, Xiangya Hospital, Central South University, Changsha, China.

Department of Laboratory Medicine, The Second Xiangya Hospital, Central South University, Changsha, China.

出版信息

Front Oncol. 2021 Mar 26;11:625838. doi: 10.3389/fonc.2021.625838. eCollection 2021.

Abstract

BACKGROUND

As the most aggressive tumors in the central nervous system, gliomas have poor prognosis and limited therapy methods. Immunotherapy has become promising in the treatment of gliomas. Here, we explored the expression pattern of APOBEC3B, a genomic mutation inducer, in gliomas to assess its value as an immune biomarker and immunotherapeutic target.

METHODS

We mined transcriptional data from two publicly available genomic datasets, TCGA and CGGA, to investigate the relevance between APOBEC3B and clinical characterizations including tumor classifications, patient prognosis, and immune infiltrating features in gliomas. We especially explored the correlation between APOBEC3B and tumor mutations. Samples from Xiangya cohort were used for immunohistochemistry staining.

RESULTS

Our findings demonstrated that APOBEC3B expression level was relatively high in advanced gliomas and other cancer types, which indicated poorer prognosis. APOBEC3B also stratified patients' survival in Xiangya cohort. APOBEC3B was significantly associated with infiltrating immune and stromal cell types in the tumor microenvironment. Notably, APOBEC3B was involved in tumor mutation and strongly correlated with the regulation of oncogenic genes.

CONCLUSION

Our findings identified that APOBEC3B could be a latent molecular target in gliomas.

摘要

背景

作为中枢神经系统中侵袭性最强的肿瘤,胶质瘤预后较差且治疗方法有限。免疫疗法在胶质瘤治疗中已显示出前景。在此,我们探究了基因组突变诱导剂载脂蛋白B mRNA编辑酶催化多肽样3B(APOBEC3B)在胶质瘤中的表达模式,以评估其作为免疫生物标志物和免疫治疗靶点的价值。

方法

我们从两个公开的基因组数据集(TCGA和CGGA)中挖掘转录数据,以研究APOBEC3B与胶质瘤的临床特征(包括肿瘤分类、患者预后和免疫浸润特征)之间的相关性。我们特别探究了APOBEC3B与肿瘤突变之间的相关性。来自湘雅队列的样本用于免疫组织化学染色。

结果

我们的研究结果表明,APOBEC3B表达水平在晚期胶质瘤和其他癌症类型中相对较高,这表明预后较差。APOBEC3B也对湘雅队列中的患者生存进行了分层。APOBEC3B与肿瘤微环境中浸润的免疫和基质细胞类型显著相关。值得注意的是,APOBEC3B参与肿瘤突变并与致癌基因的调控密切相关。

结论

我们的研究结果表明,APOBEC3B可能是胶质瘤中的一个潜在分子靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b152/8033027/cc23ae2b3af7/fonc-11-625838-g001.jpg

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