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新型阳离子-[Re(CO)(deeb)B2]配合物(其中B2为苯并咪唑衍生物)作为一种潜在的新型发光染料用于十二烷基硫酸钠-聚丙烯酰胺凝胶电泳(SDS-PAGE)分离的蛋白质。

New Cationic -[Re(CO)(deeb)B2] Complex, Where B2 Is a Benzimidazole Derivative, as a Potential New Luminescent Dye for Proteins Separated by SDS-PAGE.

作者信息

Carreño Alexander, Gacitúa Manuel, Solis-Céspedes Eduardo, Páez-Hernández Dayán, Swords Wesley B, Meyer Gerald J, Preite Marcelo D, Chávez Ivonne, Vega Andrés, Fuentes Juan A

机构信息

Center of Applied NanoSciences (CANS), Facultad de Ciencias Exactas, Universidad Andres Bello, Santiago, Chile.

Facultad de Química y Biología, USACH, Santiago, Chile.

出版信息

Front Chem. 2021 Mar 25;9:647816. doi: 10.3389/fchem.2021.647816. eCollection 2021.

DOI:10.3389/fchem.2021.647816
PMID:33842435
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8027506/
Abstract

Sodium-dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE) can be used to separate proteins based mainly on their size such as in denaturing gels. Different staining methods have been reported to observe proteins in the gel matrix, where the most used dyes are generally anionic. Anionic dyes allow for interactions with protonated amino acids, retaining the dye in the proteins. Fluorescent staining is an alternative technique considered to be sensitive, safe, and versatile. Some anionic complexes based on d transition metals have been used for this purpose, where cationic dyes have been less explored in this context. In this work, we synthesized and characterized a new monocationic rhenium complex -[Re(CO)()] (where is 4,4'-bis(ethoxycarbonyl)-2,2'-bpy and is 2,4-di---6-(3H-imidazo[4,5-c]pyridine-2-yl)phenol). We carried out a structural characterization of this complex by MS, FTIR, H NMR, DO exchange, and HHCOSY. Moreover, we carried out UV-Vis, luminescence, and cyclic voltammetry experiments to understand the effect of ligands on the complex's electronic structure. We also performed relativistic theoretical calculations using the B3LYP/TZ2P level of theory and R-TDDFT within a dielectric continuum model (COSMO) to better understand electronic transitions and optical properties. We finally assessed the potential of -[Re(CO)()] (as well as the precursor -Re(CO)()Br and the free ligand ) to stain proteins separated by SDS-PAGE. We found that only -[Re(CO)()] proved viable to be directly used as a luminescent dye for proteins, presumably due to its interaction with negatively charged residues in proteins and by weak interactions provided by . In addition, -[Re(CO)()] seems to interact preferentially with proteins and not with the gel matrix despite the presence of sodium dodecyl sulfate (SDS). In future applications, these alternative cationic complexes might be used alone or in combination with more traditional anionic compounds to generate counterion dye stains to improve the process.

摘要

十二烷基硫酸钠聚丙烯酰胺凝胶电泳(SDS - PAGE)可用于主要基于蛋白质大小来分离蛋白质,比如在变性凝胶中。据报道,不同的染色方法可用于观察凝胶基质中的蛋白质,其中最常用的染料通常是阴离子型的。阴离子染料能够与质子化的氨基酸相互作用,从而使染料保留在蛋白质中。荧光染色是一种被认为灵敏、安全且通用的替代技术。一些基于d过渡金属的阴离子配合物已被用于此目的,而在此背景下阳离子染料的探索较少。在这项工作中,我们合成并表征了一种新的单阳离子铼配合物 - [Re(CO)() ](其中 是4,4'-双(乙氧羰基)-2,2'-联吡啶, 是2,4 - 二 - - 6 - (3H - 咪唑并[4,5 - c]吡啶 - 2 - 基)苯酚)。我们通过质谱(MS)、傅里叶变换红外光谱(FTIR)、核磁共振氢谱(H NMR)、氘交换(DO exchange)和异核单量子相干谱(HHCOSY)对该配合物进行了结构表征。此外,我们进行了紫外 - 可见光谱(UV - Vis)、发光和循环伏安法实验,以了解配体对配合物电子结构的影响。我们还使用B3LYP/TZ2P理论水平和介电连续介质模型(COSMO)中的含时密度泛函理论(R - TDDFT)进行了相对论理论计算,以更好地理解电子跃迁和光学性质。我们最终评估了 - [Re(CO)() ](以及前体 - Re(CO)()Br和游离配体 )对SDS - PAGE分离的蛋白质进行染色的潜力。我们发现只有 - [Re(CO)() ]被证明可直接用作蛋白质的发光染料,这可能是由于它与蛋白质中带负电荷的残基相互作用以及 提供的弱相互作用。此外,尽管存在十二烷基硫酸钠(SDS), - [Re(CO)() ]似乎优先与蛋白质相互作用,而不与凝胶基质相互作用。在未来的应用中,这些替代的阳离子配合物可能单独使用或与更传统的阴离子化合物结合使用,以产生抗衡离子染料染色剂来改进这一过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/a691d17f037a/fchem-09-647816-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/7c34d71f0e3a/fchem-09-647816-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/f789b30fd6e7/fchem-09-647816-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/52980ab46709/fchem-09-647816-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/e105e1a08f92/fchem-09-647816-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/a691d17f037a/fchem-09-647816-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/7c34d71f0e3a/fchem-09-647816-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/f789b30fd6e7/fchem-09-647816-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/52980ab46709/fchem-09-647816-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/e105e1a08f92/fchem-09-647816-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e1a/8027506/a691d17f037a/fchem-09-647816-g004.jpg

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