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来自三文鱼的古老核糖核酸酶的结构特征揭示了一个有趣的自动抑制案例。

The structural features of an ancient ribonuclease from Salmo salar reveal an intriguing case of auto-inhibition.

机构信息

Department of Chemical Sciences, University of Naples Federico II, Complesso Universitario di Monte Sant'Angelo, Via Cintia, I-80126 Naples, Italy.

Department of Chemical Sciences, University of Naples Federico II, Complesso Universitario di Monte Sant'Angelo, Via Cintia, I-80126 Naples, Italy; CSGI (Consorzio Interuniversitario per lo Sviluppo dei Sistemi a Grande Interfase), Via della Lastruccia 3, I-50019 Sesto Fiorentino, FI, Italy.

出版信息

Int J Biol Macromol. 2021 Jul 1;182:659-668. doi: 10.1016/j.ijbiomac.2021.04.041. Epub 2021 Apr 16.

Abstract

The superfamily of vertebrate ribonucleases, a large group of evolutionarily related proteins, continues to provide interesting structural and functional information. In particular, the crystal structure of SS-RNase-2 from Salmo salar (SS2), here presented, has revealed a novel auto-inhibition mechanism that enriches the number of inhibition strategies observed in some members of the family. Within an essentially unmodified RNase folding, the SS2 active site cleft is in part obstructed by the collapse of an extra pentapeptide inserted in the C-terminal region. This unexpected intrusion alters the organization of the catalytic triad by pushing one catalytic histidine off the pocket. Possible mechanisms to remove the active site obstruction have also been studied through the production of two mutants that provide useful information on the functionality of this intriguing version of the ribonuclease superfamily.

摘要

脊椎动物核糖核酸酶超家族是一个庞大的进化相关蛋白家族,不断提供有趣的结构和功能信息。特别是,本文呈现的来自三文鱼的 SS-RNase-2(SS2)的晶体结构揭示了一种新颖的自动抑制机制,丰富了该家族某些成员观察到的抑制策略的数量。在基本未修饰的核糖核酸酶折叠中,SS2 的活性位点裂缝部分被插入 C 末端区域的额外五肽折叠所阻塞。这种意外的侵入通过将一个催化组氨酸推出口袋,改变了催化三联体的组织。通过产生两个突变体来研究去除活性位点阻塞的可能机制,这两个突变体为研究这个有趣的核糖核酸酶超家族变体的功能提供了有用的信息。

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