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从伊朗受农达污染的花园土壤中分离出的耐草甘膦细菌菌株HA-09的研究

Novel of Glyphosate-Tolerant Bacterium sp. Strain HA-09 Isolated from Roundup-Contaminated Garden Soils in Iran.

作者信息

Ghaderitabar Hadi, Mousavi Amir, Hatef Salmanian Ali, Hadi Faranak

机构信息

Department of Plant Molecular Biotechnology, Institute of Agricultural Biotechnology, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran.

Department of Plant Bioproducts, Institute of Agricultural Biotechnology, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran.

出版信息

Iran J Biotechnol. 2020 Jul 1;18(3):e2597. doi: 10.30498/IJB.2020.204133.2597. eCollection 2020 Jul.

Abstract

BACKGROUND

Glyphosate is a non-selective systemic herbicide with a broad spectrum of weed control that inhibits a key enzyme, 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase, in the shikimate pathway.

OBJECTIVES

Isolation and analysis of the () gene responsible for glyphosate-tolerance in bacteria from Roundup- contaminated soils was the aim of this study.

MATERIALS AND METHODS

Sampling was done from the soil of the gardens which were heavily contaminated by Roundup herbicide and then bacterial screening was performed in the presence of high concentrations of glyphosate. The genus of bacterium was identified via molecular methods such as 16S rRNA sequencing. The gene of this bacterium ( ) was isolated using the primers designed-upon specific regions of genes available in NCBI GenBank database. The PCR product was cloned, sequenced and subcloned into pET28a as an expression vector and transferred into E. coli strain BL21(DE3). The cells were inoculated in liquid M9 minimal medium containing IPTG and different concentrations of glyphosate.

RESULTS

The genus of bacterium was identified as sp. strain HA-09. The isolated gene from this bacterium was approximately 2.2 kb in size. Bioassay of expressing this gene showed high tolerance to glyphosate (up to 300 mM).

CONCLUSION

The gene could be considered as a novel and efficient candidate for development of glyphosate-tolerant crop plants.

摘要

背景

草甘膦是一种非选择性的内吸性除草剂,具有广泛的杂草防治谱,它能抑制莽草酸途径中的关键酶5-烯醇丙酮酸莽草酸-3-磷酸(EPSP)合酶。

目的

本研究旨在从被农达污染的土壤中分离和分析负责细菌对草甘膦耐受性的()基因。

材料与方法

从被农达除草剂严重污染的花园土壤中取样,然后在高浓度草甘膦存在的情况下进行细菌筛选。通过16S rRNA测序等分子方法鉴定细菌的属。使用基于NCBI GenBank数据库中可用的基因特定区域设计的引物分离该细菌的()基因。将PCR产物克隆、测序并亚克隆到pET28a作为表达载体,然后转入大肠杆菌BL21(DE3)菌株。将细胞接种到含有IPTG和不同浓度草甘膦的液体M9基本培养基中。

结果

该细菌的属被鉴定为sp.菌株HA-09。从该细菌中分离出的()基因大小约为2.2 kb。对表达该基因的()进行生物测定表明其对草甘膦具有高耐受性(高达300 mM)。

结论

()基因可被视为开发耐草甘膦作物的一种新型高效候选基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b52c/8035420/da8b5eaab945/IJB-18-e2597-g001.jpg

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