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用检测犬区分 SARS-CoV-2 感染患者样本:概念验证研究。

Discrimination of SARS-CoV-2 infected patient samples by detection dogs: A proof of concept study.

机构信息

Penn Vet Working Dog Center, School of Veterinary Medicine, University of Pennsylvania, Philadelphia, PA, United States of America.

Tactical Directional Canine, Smithsburg, MD, United States of America.

出版信息

PLoS One. 2021 Apr 14;16(4):e0250158. doi: 10.1371/journal.pone.0250158. eCollection 2021.

DOI:10.1371/journal.pone.0250158
PMID:33852639
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8046346/
Abstract

While the world awaits a widely available COVID-19 vaccine, availability of testing is limited in many regions and can be further compounded by shortages of reagents, prolonged processing time and delayed results. One approach to rapid testing is to leverage the volatile organic compound (VOC) signature of SARS-CoV-2 infection. Detection dogs, a biological sensor of VOCs, were utilized to investigate whether SARS-CoV-2 positive urine and saliva patient samples had a unique odor signature. The virus was inactivated in all training samples with either detergent or heat treatment. Using detergent-inactivated urine samples, dogs were initially trained to find samples collected from hospitalized patients confirmed with SARS-CoV-2 infection, while ignoring samples collected from controls. Dogs were then tested on their ability to spontaneously recognize heat-treated urine samples as well as heat-treated saliva from hospitalized SARS-CoV-2 positive patients. Dogs successfully discriminated between infected and uninfected urine samples, regardless of the inactivation protocol, as well as heat-treated saliva samples. Generalization to novel samples was limited, particularly after intensive training with a restricted sample set. A unique odor associated with SARS-CoV-2 infection present in human urine as well as saliva, provides impetus for the development of odor-based screening, either by electronic, chemical, or biological sensing methods. The use of dogs for screening in an operational setting will require training with a large number of novel SARS-CoV-2 positive and confirmed negative samples.

摘要

虽然全球正在等待广泛可用的 COVID-19 疫苗,但许多地区的检测可用性有限,而且试剂短缺、处理时间延长和结果延迟等问题可能会进一步加剧。快速检测的一种方法是利用 SARS-CoV-2 感染的挥发性有机化合物 (VOC) 特征。检测犬是 VOC 的生物传感器,被用于研究 SARS-CoV-2 阳性尿液和唾液患者样本是否具有独特的气味特征。病毒在用清洁剂或热处理灭活后,所有训练样本中均被灭活。使用经清洁剂灭活的尿液样本,犬最初被训练用于寻找从确诊 SARS-CoV-2 感染的住院患者中采集的样本,同时忽略从对照中采集的样本。然后,犬被测试是否能够自发识别经热处理的尿液样本以及来自住院 SARS-CoV-2 阳性患者的经热处理的唾液。无论使用哪种灭活方案,犬都能成功区分感染和未感染的尿液样本,以及经热处理的唾液样本。对新型样本的泛化能力有限,尤其是在使用受限的样本集进行强化训练之后。人类尿液和唾液中存在与 SARS-CoV-2 感染相关的独特气味,这为基于气味的筛选方法的发展提供了动力,无论是电子、化学还是生物传感方法。在实际环境中使用犬进行筛查,需要用大量新型 SARS-CoV-2 阳性和确诊阴性样本进行训练。

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Methods of Inactivation of SARS-CoV-2 for Downstream Biological Assays.用于下游生物学检测的 SARS-CoV-2 灭活方法。
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