Department of Laboratory Medicine, Panjin Liaoyou Gem Flower Hospital.
Department of General Practice, Panjin Liaoyou Gem Flower Hospital.
Genes Genet Syst. 2021 Jul 14;96(2):71-80. doi: 10.1266/ggs.20-00053. Epub 2021 Apr 22.
The onset of Sjögren's syndrome (SS) is hidden, early diagnosis is difficult, and the disorder seriously endangers the physical and mental health of affected people. This study aims to identify potential biomarkers of SS and to investigate the characteristics of immune cell infiltration. We used four SS gene expression profile data series from the Gene Expression Omnibus database, and applied bioinformatics analysis and machine learning algorithms to screen two biomarkers, SELL (L-selectin) and IFI44 (interferon-induced protein 44), from 101 differentially expressed genes. The two-gene model comprising SELL and IFI44 showed good diagnostic ability for SS in the training set (AUC = 0.992) and verification set (AUC = 0.917). Analysis of infiltrating immune cells in SS identified naive B cells, resting CD4 memory T cells, activated CD4 memory T cells, gamma delta T cells, M0 macrophages, M1 macrophages, plasma cells, CD8 T cells, activated NK cells and monocytes as candidate participants in the SS process. Furthermore, SELL was associated with M2 macrophages, activated CD4 memory T cells, gamma delta T cells, resting NK cells and plasma cells, while IFI44 was associated with activated mast cells, resting NK cells, resting mast cells and CD8 T cells. This study demonstrates that SELL and IFI44 can serve as good diagnostic markers for SS and may also be new diagnostic and therapeutic targets for SS.
干燥综合征(SS)的发病隐匿,早期诊断困难,严重危害患者的身心健康。本研究旨在寻找 SS 的潜在生物标志物,并探讨免疫细胞浸润的特征。我们使用了来自基因表达综合数据库的四个 SS 基因表达谱数据集,应用生物信息学分析和机器学习算法从 101 个差异表达基因中筛选出两个生物标志物,SELL(L-选择素)和 IFI44(干扰素诱导蛋白 44)。由 SELL 和 IFI44 组成的双基因模型在训练集(AUC=0.992)和验证集(AUC=0.917)中对 SS 具有良好的诊断能力。对 SS 浸润免疫细胞的分析确定了幼稚 B 细胞、静止 CD4 记忆 T 细胞、活化 CD4 记忆 T 细胞、γδ T 细胞、M0 巨噬细胞、M1 巨噬细胞、浆细胞、CD8 T 细胞、活化 NK 细胞和单核细胞是 SS 过程中的候选参与者。此外,SELL 与 M2 巨噬细胞、活化的 CD4 记忆 T 细胞、γδ T 细胞、静止 NK 细胞和浆细胞相关,而 IFI44 与活化的肥大细胞、静止 NK 细胞、静止肥大细胞和 CD8 T 细胞相关。本研究表明,SELL 和 IFI44 可以作为 SS 的良好诊断标志物,也可能成为 SS 的新的诊断和治疗靶点。