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山鸡蛙的完整线粒体基因组, 。 (你提供的原文不完整,请补充完整后以便准确翻译。)

The complete mitogenome of the Mountain chicken frog, .

作者信息

White Nina F D, Cunningham Andrew A, Hudson Michael A, Orozco-terWengel Pablo

机构信息

Cardiff University School of Biosciences, Cardiff, UK.

Institute of Zoology, Zoological Society of London, London, UK.

出版信息

Mitochondrial DNA B Resour. 2021 Apr 8;6(4):1372-1373. doi: 10.1080/23802359.2021.1907809.

DOI:10.1080/23802359.2021.1907809
PMID:33889754
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8043546/
Abstract

The mountain chicken frog () is a critically endangered frog native to the Caribbean islands of Dominica and Montserrat. Over the past 25 years their populations have declined by over 85%, largely due to a chytridiomycosis outbreak that nearly wiped out the Montserratian population. Within the context of developing tools that can aid in the conservation of the mountain chicken frog, we assembled its complete mitochondrial genome, contributing the first complete mitogenome of the genus Leptodactylus (Genbank Accession number MW260634). The circular genome is 18,669 bp long and contains 37 genes. A phylogenetic analysis reveals that forms a clade with , highlighting the close relationship of Leptodactylus spp. relative to other species from the superfamily Hyloidea included in the analysis.

摘要

多米尼克裸背蟾蜍是一种极度濒危的蛙类,原产于加勒比海的多米尼克岛和蒙特塞拉特岛。在过去25年里,它们的数量减少了85%以上,主要原因是一场壶菌病疫情,几乎使蒙特塞拉特岛的种群灭绝。在开发有助于保护多米尼克裸背蟾蜍的工具的背景下,我们组装了其完整的线粒体基因组,贡献了细趾蟾属的首个完整有丝分裂基因组(Genbank登录号MW260634)。这个环状基因组长度为18,669碱基对,包含37个基因。系统发育分析表明, 与 形成一个进化枝,突出了细趾蟾属物种相对于分析中包含的雨蛙超科其他物种的密切关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22a5/8043546/7320f90c3613/TMDN_A_1907809_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22a5/8043546/7320f90c3613/TMDN_A_1907809_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22a5/8043546/7320f90c3613/TMDN_A_1907809_F0001_B.jpg

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本文引用的文献

1
NOVOPlasty: de novo assembly of organelle genomes from whole genome data.NOVOPlasty:从头组装细胞器基因组的全基因组数据。
Nucleic Acids Res. 2017 Feb 28;45(4):e18. doi: 10.1093/nar/gkw955.
2
Dynamics and genetics of a disease-driven species decline to near extinction: lessons for conservation.一种疾病驱动的物种数量下降至近乎灭绝的动态与遗传学:保护的教训
Sci Rep. 2016 Aug 3;6:30772. doi: 10.1038/srep30772.
3
Efficient sequencing of Anuran mtDNAs and a mitogenomic exploration of the phylogeny and evolution of frogs.高效测序蛙类 mtDNA 及对蛙类系统发育和进化的线粒体基因组学研究。
Mol Biol Evol. 2013 Aug;30(8):1899-915. doi: 10.1093/molbev/mst091. Epub 2013 May 11.
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Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.直接从基因组下一代测序读段重建线粒体基因组——一种诱饵和迭代映射方法。
Nucleic Acids Res. 2013 Jul;41(13):e129. doi: 10.1093/nar/gkt371. Epub 2013 May 9.
5
MITOS: improved de novo metazoan mitochondrial genome annotation.MITOS:改进的从头后生动物线粒体基因组注释。
Mol Phylogenet Evol. 2013 Nov;69(2):313-9. doi: 10.1016/j.ympev.2012.08.023. Epub 2012 Sep 7.