Experimental Cardiology Unit, Department of Cardiovascular Medicine, University of Lausanne Medical School, Lausanne, Switzerland.
Department of Computational Biology, University of Lausanne, Lausanne, Switzerland.
Mol Vis. 2021 Mar 18;27:107-116. eCollection 2021.
Heterozygous mutations in the gene , encoding a pre-mRNA splicing factor, cause autosomal dominant retinitis pigmentosa (adRP) with reduced penetrance. At the molecular level, pathogenicity results from haploinsufficiency, as the largest majority of such mutations trigger nonsense-mediated mRNA decay or involve large deletions of coding exons. We investigated genetically two families with a history of adRP, one of whom showed incomplete penetrance.
All patients underwent thorough ophthalmological examination, including electroretinography (ERG) and Goldmann perimetry. Array-based comparative genomic hybridization (aCGH) and multiplex ligation-dependent probe amplification (MLPA) were used to map heterozygous deletions, while real-time PCR on genomic DNA and long-range PCR allowed resolving the mutations at the base-pair level. transcripts were quantified with real-time PCR on patient-derived lymphoblastoid cell lines.
We identified two independent deletions affecting the promoter and the 5' untranslated region (UTR) of but leaving its coding sequence completely unaltered. Analysis of mRNA from lymphoblastoid cell lines from one of these families showed reduced levels of expression in patients versus controls, probably due to the heterozygous ablation of its promoter sequences.
In addition to reporting the identification of two novel noncoding deletions in , this study provides strong additional evidence that mRNA-mediated haploinsufficiency is the primary cause of pathogenesis for -linked adRP.
编码前体 mRNA 剪接因子的基因突变导致常染色体显性视网膜色素变性(adRP),其外显率降低。在分子水平上,致病性是由于杂合不足引起的,因为大多数此类突变会引发无义介导的 mRNA 降解或涉及编码外显子的大片段缺失。我们对有 adRP 病史的两个家族进行了基因研究,其中一个家族表现出不完全外显率。
所有患者均接受了全面的眼科检查,包括视网膜电图(ERG)和 Goldmann 视野检查。基于阵列的比较基因组杂交(aCGH)和多重连接依赖性探针扩增(MLPA)用于定位杂合性缺失,而基因组 DNA 的实时 PCR 和长距离 PCR 允许解析碱基对水平的突变。使用实时 PCR 在患者来源的淋巴母细胞系中定量 转录物。
我们鉴定了两个独立的缺失,影响 的启动子和 5'非翻译区(UTR),但完全不改变其编码序列。对其中一个家族的淋巴母细胞系中的 mRNA 进行分析表明,与对照组相比,患者的表达水平降低,可能是由于其启动子序列的杂合性缺失所致。
除了报告鉴定出 的两个新的非编码缺失外,本研究还提供了强有力的额外证据,表明 mRNA 介导的杂合不足是 - 连锁 adRP 发病机制的主要原因。