Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.
Phys Chem Chem Phys. 2021 May 14;23(18):10835-10844. doi: 10.1039/d0cp05864e. Epub 2021 Apr 28.
Tracking the movement of fluorescent single-molecule (SM) tracers has provided several new insights into the local structure and dynamics in complex environments such as soft materials and biological systems. However, SM tracking (SMT) remains unreliable at molecular length scales, as the localization error (LE) of SM trajectories (∼30-50 nm) is considerably larger than the size of molecular tracers (∼1-2 nm). Thus, instances of tracer (im)mobility in heterogeneous media, which provide indicators for underlying anomalous-transport mechanisms, remain obscured within the realms of SMT. Since the translation of passive tracers in an isotropic media is associated with fast dipolar rotation, we propose that authentic pauses within the LE can be revealed by probing the hindrance of SM reorientational dynamics. Here, we demonstrate how polarization-resolved SMT (PR-SMT) can provide emission anisotropy at each super-localized position, thereby revealing the tumbling propensity of SMs during random walks. For rhodamine 6G tracers undergoing heterogeneous transport in a hydrated polyvinylpyrrolidone (PVP) network, analysis of PR-SMT trajectories enabled us to discern instances of genuine immobility and localized motion within the LE. Our investigations on 100 SMs in (plasticized) PVP films reveal a wide distribution of dwell times and pause frequencies, demonstrating that most probes intermittently experience complete translational and rotational immobilization. This indicates that tracers serendipitously encounter compact, rigid polymer cavities during transport, implying the existence of nanoscale glass-like domains sparsely distributed in a predominantly deep-rubbery polymer network far above the glass transition.
追踪荧光单分子 (SM) 示踪剂的运动为复杂环境(如软物质和生物系统)中的局部结构和动力学提供了新的见解。然而,SM 跟踪 (SMT) 在分子长度尺度上仍然不可靠,因为 SM 轨迹的定位误差 (LE)(∼30-50nm)明显大于分子示踪剂的大小(∼1-2nm)。因此,在异质介质中示踪剂(不)流动性的实例,为潜在的异常输运机制提供了指标,但仍隐藏在 SMT 的范围内。由于各向同性介质中被动示踪剂的平移与快速偶极子旋转相关,因此我们提出可以通过探测 SM 重取向动力学的阻碍来揭示 LE 内的真实停顿。在这里,我们展示了偏振分辨 SMT(PR-SMT)如何在每个超局部化位置提供发射各向异性,从而揭示 SM 在随机游动过程中的翻滚倾向。对于在水合聚乙烯吡咯烷酮 (PVP) 网络中经历非均相输运的若丹明 6G 示踪剂,PR-SMT 轨迹的分析使我们能够分辨 LE 内真正的不活动和局部运动的实例。我们对(增塑)PVP 薄膜中的 100 个 SM 的研究揭示了停留时间和暂停频率的广泛分布,表明大多数探针间歇性地经历完全的平移和旋转固定。这表明示踪剂在输运过程中偶然遇到致密、刚性的聚合物腔,这意味着在玻璃化转变以上主要为深橡胶状聚合物网络中稀疏分布纳米级玻璃状域。