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通过二代测序在一个Birt-Hogg-Dubé综合征家系中鉴定出一种新型基因内缺失及文献综述

A Novel Intragenic Deletion Identified by NGS in a BHDS Family and Literature Review.

作者信息

Cai Minghui, Zhang Xinxin, Fan Lizhen, Cheng Shuwen, Kiram Abdukahar, Cen Shaoqin, Chen Baofu, Ye Minhua, Gao Qian, Zhu Chengchu, Yi Long, Ma Dehua

机构信息

Department of Cardiothoracic Surgery, Taizhou Hospital of Zhejiang Province affiliated to Wenzhou Medical University, Linhai, China.

Department of Histology and Embryology, School of Medicine, Southeast University, Nanjing, China.

出版信息

Front Genet. 2021 Apr 1;12:636900. doi: 10.3389/fgene.2021.636900. eCollection 2021.

Abstract

Birt-Hogg-Dubé syndrome (BHDS, MIM #135150), caused by germline mutations of gene, is a rare autosomal dominant inherited disorder characterized by skin fibrofolliculomas, renal cancer, pulmonary cysts and spontaneous pneumothorax. The syndrome is considered to be under-diagnosed due to variable and atypical manifestations. Herein we present a BHDS family. Targeted next generation sequencing (NGS) and multiplex ligation-dependent probe amplification (MLPA) revealed a novel intragenic deletion spanning exons 10-14 in four members including the proband with pulmonary cysts and spontaneous pneumothorax, one member with suspicious skin lesions and a few pulmonary cysts, as well as two asymptomatic family members. In addition, a linkage analysis further demonstrated one member with pulmonary bullae to be a BHDS-ruled-out case, whose bullae presented more likely as an aspect of paraseptal emphysema. Furthermore, the targeted NGS and MLPA data including our previous and present findings were reviewed and analyzed to compare the advantages and disadvantages of the two methods, and a brief review of the relevant literature is included. Considering the capability of the targeted NGS method to detect large intragenic deletions as well as determining deletion junctions, and the occasional false positives of MLPA, we highly recommend targeted NGS to be used for clinical molecular diagnosis in suspected BHDS patients.

摘要

Birt-Hogg-Dubé综合征(BHDS,MIM #135150)由 基因的种系突变引起,是一种罕见的常染色体显性遗传性疾病,其特征为皮肤纤维毛囊瘤、肾癌、肺囊肿和自发性气胸。由于临床表现多样且不典型,该综合征被认为诊断不足。在此我们报告一个BHDS家系。靶向二代测序(NGS)和多重连接依赖探针扩增(MLPA)揭示了一个新的基因内缺失,该缺失跨越第10至14外显子,涉及四名家庭成员,包括患有肺囊肿和自发性气胸的先证者、一名有可疑皮肤病变和一些肺囊肿的成员以及两名无症状家庭成员。此外,连锁分析进一步证明一名患有肺大疱的成员为排除BHDS的病例,其肺大疱更可能是间隔旁肺气肿的一种表现。此外,对包括我们之前和目前研究结果在内的靶向NGS和MLPA数据进行了回顾和分析,以比较这两种方法的优缺点,并对相关文献进行了简要综述。考虑到靶向NGS方法检测基因内大片段缺失以及确定缺失连接点的能力,以及MLPA偶尔出现的假阳性结果,我们强烈建议将靶向NGS用于疑似BHDS患者的临床分子诊断。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff54/8078137/3a7ad18f755c/fgene-12-636900-g001.jpg

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