Drug Discovery and Design Center, State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Shanghai 201203, China; University of Chinese Academy of Sciences, 19 Yuquan Road, Beijing 100049, China.
Drug Discovery and Design Center, State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Shanghai 201203, China; Shanghai Institute for Advanced Immunochemical Studies, and School of Life Science and Technology, ShanghaiTech University, Shanghai 200031, China; University of Chinese Academy of Sciences, 19 Yuquan Road, Beijing 100049, China.
Bioorg Chem. 2021 Jul;112:104912. doi: 10.1016/j.bioorg.2021.104912. Epub 2021 Apr 20.
Orphan nuclear receptor Nur77 is a unique member of the NR4A nuclear receptor subfamily, which is critical for cellular processes especially the inflammatory responses. Many efforts have been made to discover novel scaffold small molecules targeting Nur77. Herein, we evaluated the previously reported binding sites in crystal structures of Nur77 with small molecules, and then discovered compound 13 as a hit of Nur77 via virtual screening targeting the best-scored binding site. Based on the results of fluorescence titration assay, structure-activity relationship (SAR) analysis was summarized for compound 13 and its analogs. Among these analogs, compound 13e displayed the most potent binding affinity (0.54 ± 0.02 μM). The binding mode of compound 13e was predicted via molecule docking. Moreover, 13e exhibited significant anti-inflammation activity in TNF-α induced HepG2 cell model. Taken together, these results provided a new insight into the understanding the functions of specific binding sites on Nur77 for small molecular compounds, and the development of new scaffold Nur77 modulators.
孤儿核受体 Nur77 是 NR4A 核受体亚家族的独特成员,对细胞过程,特别是炎症反应至关重要。人们已经做出了许多努力来发现针对 Nur77 的新型支架小分子。在此,我们评估了 Nur77 与小分子的晶体结构中先前报道的结合位点,然后通过针对最佳评分结合位点的虚拟筛选发现了化合物 13 作为 Nur77 的命中。基于荧光滴定实验的结果,总结了化合物 13 及其类似物的构效关系(SAR)分析。在这些类似物中,化合物 13e 显示出最强的结合亲和力(0.54±0.02μM)。通过分子对接预测了化合物 13e 的结合模式。此外,化合物 13e 在 TNF-α 诱导的 HepG2 细胞模型中表现出显著的抗炎活性。总之,这些结果为小分子化合物 Nur77 特定结合位点的功能以及新型支架 Nur77 调节剂的开发提供了新的见解。