Industrial Bio-Materials Research Center, KRIBB, Daejeon 34141, Korea.
Division of Life Sciences, Korea Polar Research Institute, Incheon 21990, Korea.
Biomolecules. 2021 Apr 30;11(5):680. doi: 10.3390/biom11050680.
Endo-β-1,4-xylanase is a key enzyme in the degradation of β-1,4-d-xylan polysaccharides through hydrolysis. A glycoside hydrolase family 10 (GH10) endo-β-1,4-xylanase (XylR) from sp. PAMC 27433, an Antarctic soil bacterium, was identified and functionally characterized. The XylR gene (1122-bp) encoded an acidic protein containing a single catalytic GH10 domain that was 86% identical to that of an uncultured bacterium BLR13 endo-β-1,4-xylanase (ACN58881). The recombinant enzyme (rXylR: 42.0 kDa) showed the highest beechwood xylan-degrading activity at pH 5.5 and 40 °C, and displayed 12% of its maximum activity even at 4 °C. rXylR was not only almost completely inhibited by 5 mM -bromosuccinimide or metal ions (each 1 mM) including Hg, Ca, or Cu but also significantly suppressed by 1 mM Ni, Zn, or Fe. However, its enzyme activity was upregulated (>1.4-fold) in the presence of 0.5% Triton X-100 or Tween 80. The specific activities of rXylR toward beechwood xylan, birchwood xylan, oat spelts xylan, and -nitrophenyl-β-d-cellobioside were 274.7, 103.2, 35.6, and 365.1 U/mg, respectively. Enzymatic hydrolysis of birchwood xylan and d-xylooligosaccharides yielded d-xylose and d-xylobiose as the end products. The results of the present study suggest that rXylR is a novel cold-adapted d-xylobiose- and d-xylose-releasing endo-β-1,4-xylanase.
内切-β-1,4-木聚糖酶是通过水解降解β-1,4-d-木聚糖多糖的关键酶。一种来自南极土壤细菌 sp. PAMC 27433 的糖苷水解酶家族 10 (GH10) 内切-β-1,4-木聚糖酶 (XylR) 被鉴定并进行了功能表征。XylR 基因(1122-bp)编码一种酸性蛋白,含有一个单一的催化 GH10 结构域,与未培养细菌 BLR13 内切-β-1,4-木聚糖酶(ACN58881)的同源性为 86%。重组酶(rXylR:42.0 kDa)在 pH 5.5 和 40°C 下对桦木木聚糖的降解活性最高,即使在 4°C 下也显示出其最大活性的 12%。rXylR 不仅几乎完全被 5 mM -溴琥珀酰亚胺或包括 Hg、Ca 或 Cu 在内的 1 mM 金属离子抑制,而且还被 1 mM Ni、Zn 或 Fe 显著抑制。然而,在 0.5%Triton X-100 或 Tween 80 的存在下,其酶活性上调(>1.4 倍)。rXylR 对桦木木聚糖、桦木木聚糖、燕麦木二糖和-硝基苯-β-d-纤维二糖苷的比活性分别为 274.7、103.2、35.6 和 365.1 U/mg。桦木木聚糖和 d-木寡糖的酶解产物为 d-木糖和 d-木二糖。本研究结果表明,rXylR 是一种新型的耐冷 d-木二糖和 d-木糖释放内切-β-1,4-木聚糖酶。